Gene Shew185_1317 details

Gene Information

• Locus tag: Shew185_1317
• ID: 5370364
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS185
• Kingdom: Bacteria
• Replicon accession: NC_009665
• Strand: +
• Start bp: 1572072
• End bp: 1572791
• Gene Length: 720 bp
• Protein Length: 239 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 640829516
• Product: hypothetical protein
• Protein accession: YP_001365530
• Protein GI: 152999849
• TIGRFAM ID: [TIGR02001] conserved hypothetical protein, proteobacterial

Plasmid Coverage information

• Num covering plasmid clones: 33
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAAAAT TAATAATGAA ATCAAAATGT TTTTATCTTG TCGCCGGCGG ATTATTATTG 
ATGTCGACTG CGGCGAATGC CGGATTATCG GCTACTGTGA CGGCGACGTC GGATTACACT 
TTTAACGGTG TCAGCCAAAC GGACAACGGC CCAGCACTGC AAGGCAGTCT GGATTACGGT 
TTTGATTCGG GATGGTACGT GGGCGGCTTT ACCTCGAACG TCGACTTTGG TGGCAGCGAT 
GACACTTGGT TAGAGCTCGA TGCCTATGCG GGTAAGTACT TTCAGTTGAA TAAACAATTG 
AGTCTCGATG TCGGACTGGC CTATTACACC TACCACGGCG ATTCCTTCTC TGATGAGTAC 
AACTATCCTG AGCTGTATAG CAAGCTAGGT TACGACACTT CCCTTGGCCA CTCTGAAGCT 
AAGTTAACCT ACACATGGGA CTACTTTGGT TTAGGCGGCG GACATTACAC TATGTTGCTC 
GGCCATACGA TTAGCGTTGC CGAAGGCCAT GATATTCGCT TCAGTGTTGA CCGCTCGACG 
TCACTCGATG AAGACAAATG GTCATGGGAT GGCGGTAAAT CCTTTAATCA CTTCCGCGTT 
GCCTATATGA CCAGCTGGAG CGGCTTTGAT TTCAGCCTTG CCGCTGAAGA TACCAGCATG 
AACTTAGATA CCAGTGACGA GCGCCTGGTG TTGTCGGTAT CGCGCCAATT CATGTTGTAA 

 

Protein sequence

MEKLIMKSKC FYLVAGGLLL MSTAANAGLS ATVTATSDYT FNGVSQTDNG PALQGSLDYG 
FDSGWYVGGF TSNVDFGGSD DTWLELDAYA GKYFQLNKQL SLDVGLAYYT YHGDSFSDEY 
NYPELYSKLG YDTSLGHSEA KLTYTWDYFG LGGGHYTMLL GHTISVAEGH DIRFSVDRST 
SLDEDKWSWD GGKSFNHFRV AYMTSWSGFD FSLAAEDTSM NLDTSDERLV LSVSRQFML