| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1312 |
|---|
| Symbol | |
|---|
| ID | 5370444 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | - |
|---|
| Start bp | 1564951 |
|---|
| End bp | 1566099 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640829511 |
|---|
| Product | iron-containing alcohol dehydrogenase |
|---|
| Protein accession | YP_001365525 |
|---|
| Protein GI | 152999844 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1454] Alcohol dehydrogenase, class IV |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGCTA AATTTTTTAT TCCTTCTGTC AACGTATTAG GCCAAGGCGC AGTGGATGAC
GCTATCGGTG ACATCAAAAC CTTAGGCTTT AAACACGCAC TCATAGTGAC AGACAAACCC
TTAGTCAAAA TTGGCTTAGT CGGTGAAGTG GCCGAAAAAC TTGGTCAAAA TGGCATTACC
TCCACCATCT ATGATGGCGT ACAACCTAAC CCAACCGTGA CGAACGTCGA AGCCGGTTTA
GCCCTGTTAA AAGCTAACAA TTGTGACTTT GTGATTTCAC TCGGTGGCGG CTCACCCCAT
GATTGCGCCA AAGGTATCGC CCTTGTTGCC ACCAATGGCG GCAGCATTAA GGACTACGAA
GGGTTAGATC AATCCGCAAA ACCACAATTG CCGTTAGTGG CTATTAATAC GACGGCAGGT
ACTGCCAGTG AAATGACGCG CTTCTGTATC ATTACCGACG AAGCCCGCCA CATTAAAATG
GCGATTGTCG ATAAGCACAC TACGCCTTTG CTGTCGGTCA ATGACCCTGA GCTCATGCTG
AAAAAGCCTG CGAGCCTCAC GGCCGCAACC GGTATGGATG CACTGACTCA CGCGGTTGAA
GCCTATGTGT CTATTGCTGC CAACCCGATC ACCGACGCCT GCGCGATCAA GGCCATGGAA
TTGATTCAGG CTAACTTAGT CAACGCGGTT GAAAACGGTC AAGACATCAA CGCCCGTGAA
CAAATGGCCT ACGCCCAGTT CTTAGCGGGT ATGGCCTTTA ACAATGCCAG CTTAGGTTAT
GTGCATGCGA TGGCGCACCA ATTAGGCGGT TTCTACGATC TGCCCCACGG TGTGTGTAAC
GCTCTGCTGC TGCCCCATGT ACAGGAATAC AACGCCCAGG TCGTCCCTGC TCGCTTGAAA
GATATTGCCA AGGCTATGGG TGTGGATGTG TCTGGCATGA CCGATGAGCA AGGTGCCAGT
GCGGCAATAG CGGCAATCAA AAAGCTGTCT GTTGCGGTTA AGATCCCTGA AAACCTGACC
TTATTAGGCG TGAAAGCGGA AGATATTCCA ACACTTGCGG ATAACGCGTT AAAAGATGCC
TGTGGATTCA CCAATCCAAA ACAAGCGACC CATGCGGAGA TCTGTCAGAT CTTCACTAAT
GCGCTGTAA
|
|---|
| Protein sequence | MAAKFFIPSV NVLGQGAVDD AIGDIKTLGF KHALIVTDKP LVKIGLVGEV AEKLGQNGIT
STIYDGVQPN PTVTNVEAGL ALLKANNCDF VISLGGGSPH DCAKGIALVA TNGGSIKDYE
GLDQSAKPQL PLVAINTTAG TASEMTRFCI ITDEARHIKM AIVDKHTTPL LSVNDPELML
KKPASLTAAT GMDALTHAVE AYVSIAANPI TDACAIKAME LIQANLVNAV ENGQDINARE
QMAYAQFLAG MAFNNASLGY VHAMAHQLGG FYDLPHGVCN ALLLPHVQEY NAQVVPARLK
DIAKAMGVDV SGMTDEQGAS AAIAAIKKLS VAVKIPENLT LLGVKAEDIP TLADNALKDA
CGFTNPKQAT HAEICQIFTN AL
|
|---|
| |