| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1306 |
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| Symbol | |
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| ID | 5370176 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 1555553 |
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| End bp | 1558015 |
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| Gene Length | 2463 bp |
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| Protein Length | 820 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640829505 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_001365519 |
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| Protein GI | 152999838 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000196501 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACCAT TTCGTTTGTC GCTAACTGCA CTCGCCTGCC TTTCTGTTTT ATCACAAACC
GCACACGCCG AAGTCAACTC GACATCAGCA AATGCTGAAG CCAACGTTGA GCGCATCACG
GTTTATGGCA GACAGAACTC AGTAGTGAAG AATTCAGGGC TGGCGACTAA ATCCGACATG
TCTCTTATGG AAACCCCAGC AGCAGTAGTG ATTGTTGACC AAGAGCTGAT CGAAACCCAA
GGTACAGATA ATCTGCAGGA CTTGATCCGT AACATCAGTG GCGTGACTCA AGCGGGAAAT
AACTATGGCA TTGGTGACAA CATAGTCATC CGTGGTTTAG GCGCAAATTA CACCTATGAC
GGTATGTATG GCGGTGCAGG CCTAGGAAAT ACCTTTAACC CTACGCGCTC TTTAACCAAC
GTTGAATCCG TTGAAGTATT AAAAGGCCCA GCGACTGGAC TCTATGGCAT GGGAAGTGCT
GGCGGCGTGA TCAATCTGAT TGAAAAGAAA CCGCAGTTTG AGTCAAAGCA TAAGTTCAGC
GCCGAAATGG GCCAATGGGA CACCTACTCC CTTGCTCTGG ATAGCACGGG CGGCCTGAGT
GATGATGTCG CCTACCGTTT AGTGGCCAAA TCTGGCCGCA GTGATGGGTA TCGCGATATC
GGTACAGACA GAGACGAAAT CTATGGCGCC TTAAAATGGG TATTAAGTGA TAGCCAAGAT
TTAATGCTTT CAGGTGCTTA CATAAAAGAT GCTATTGCCG TTGATTCAAT TGGTCACCCG
ATTCGGATTT ACAATGCAGA ATCTGTCGGT GGCAAGGGCG CTGGCGAGGT TACGTGGCAA
GATCTGGTCA ATGATCCCAA TGGTAATGGT CTACAACTCA CCGATGCACA GCGTCAGCAG
TTAGCGGCCT CGTTGTCGGG CGCTGACGGC TTAACCCCCT ATTCGTTTGG TGATGCTGGG
CTGATTTCGC CCATGGCGAA GGACAATGAG GGTGAAGAGT TAAGATTTAA ACTGACCCAT
AATATCTATT TCACTGACAA TTTGTTCCTC AATCAACAAT TGCAGTATCG CGACTACACG
TCAGGTTTCG CCCGCCAAAC TGGTGCCTAT AACTATGTCT ATTGGAAGCG TAACATCAAG
ATTAAAAACG TTCTTACCGA CGTGATTAAC GAAGAGCCTA GATCGCCATT AGTTGAAAAT
GGCGTACTTT ATCCTTTTGC CGCAAGACGT CAGGAATACC GTAAAGTCGA TGCCGACGAG
ACGTCGTGGC AGTACTTTGC CGATCTACGT TATGACTTCC AAATTGGCAA TATAGACAAT
GAATTATTGG TCAATGCCAA CTATGAAGAC CGTAATATTC GTTTCCAGCA ATATTCTATC
TTCGATGCCG ATCAAATTTA TAAAAAAAAG GATGGAGACA TTACTTATCA AGGTTCCCTG
CCTTATATTT ACGACATCCG TAATCCTAAT TGGGGCACAG GTAAGTTTGA GGACTATGAC
CCACTCAAGA CCGCTAACTA CGACAAAAAG GTCAGCGCTT GGGGTTTAGG CGTACAACAC
GTGGGATATT TAGGACATGG CTTCACCACA CGTGTAGGCG TTGCCTTTAA CGAGATAAAA
CAAAGTTATG AACACTTAGG TGTCGATGAA CGCTATAGTG CAAGTCAAGC TGCTGCGACG
CAGGAAGAGG ACACTACGGA TAACGGCATC ACCTATAATT TAGGTTTAAC TTATATGCCA
ACAGACGATT TATCTTTCTT TGTGAACCAC TCTAAGGGGC GGACTGCTTA CAGTATATTA
GGCACTGTGA CCGGCAAAAA TACTGACCGT GAAGATTCAG AATCGGTAAG CAATGATCTG
GGTATGCGCT TTAAAGCCTT TGATGATCAA ATGCTCGCAT CATTGGTGCT CTTTAAGAGC
TCGCGCACCA ATGTGCCCTA TACGAATGAA GAATATAAAA TAGGCGTATC AGGACCAGAA
GTACCCGTGT ATTTTTACGA CGGAAGTGAA GATACCCAAG GGGTTGAACT CGATCTCAAT
GCCCACTTAA ACGACAGCTG GCGTATCAAC CTTAACGGCA TGTACCAAGA TGCAAGGGAT
AAACAAAATC CAAGTAGTTT AACCTACAAT AGCCGTCAAA AAGGCGTGCC TTATCTCACT
GCCAGCGCTT GGGTGACCTA TGGCGCCGAT TGGTTTAGCT TATCAAGCCC AATCGAATTA
AGCCTTGGTG CTAAATTTGT AGATGATCGC AGCACGCACT CTAGCTCATT TGGTATTCCA
GACGGTTACG TGCCTAGCTA TACCGTCGTT GACTCGGCGG TGAGTTACAG CACTGATTCT
TGGAAAATCC AGCTTAATAT CAATAATCTA TTCAATAAAG ACTATTACAG TAAAGCGATG
TTCTTAGGTG GTATGCCGGG TGAAGAACGC AACGTCAAAC TGCAATACAG CTATAGTTTT
TGA
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| Protein sequence | MKPFRLSLTA LACLSVLSQT AHAEVNSTSA NAEANVERIT VYGRQNSVVK NSGLATKSDM
SLMETPAAVV IVDQELIETQ GTDNLQDLIR NISGVTQAGN NYGIGDNIVI RGLGANYTYD
GMYGGAGLGN TFNPTRSLTN VESVEVLKGP ATGLYGMGSA GGVINLIEKK PQFESKHKFS
AEMGQWDTYS LALDSTGGLS DDVAYRLVAK SGRSDGYRDI GTDRDEIYGA LKWVLSDSQD
LMLSGAYIKD AIAVDSIGHP IRIYNAESVG GKGAGEVTWQ DLVNDPNGNG LQLTDAQRQQ
LAASLSGADG LTPYSFGDAG LISPMAKDNE GEELRFKLTH NIYFTDNLFL NQQLQYRDYT
SGFARQTGAY NYVYWKRNIK IKNVLTDVIN EEPRSPLVEN GVLYPFAARR QEYRKVDADE
TSWQYFADLR YDFQIGNIDN ELLVNANYED RNIRFQQYSI FDADQIYKKK DGDITYQGSL
PYIYDIRNPN WGTGKFEDYD PLKTANYDKK VSAWGLGVQH VGYLGHGFTT RVGVAFNEIK
QSYEHLGVDE RYSASQAAAT QEEDTTDNGI TYNLGLTYMP TDDLSFFVNH SKGRTAYSIL
GTVTGKNTDR EDSESVSNDL GMRFKAFDDQ MLASLVLFKS SRTNVPYTNE EYKIGVSGPE
VPVYFYDGSE DTQGVELDLN AHLNDSWRIN LNGMYQDARD KQNPSSLTYN SRQKGVPYLT
ASAWVTYGAD WFSLSSPIEL SLGAKFVDDR STHSSSFGIP DGYVPSYTVV DSAVSYSTDS
WKIQLNINNL FNKDYYSKAM FLGGMPGEER NVKLQYSYSF
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