Gene Shew185_1293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1293 
Symbol 
ID5371555 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1538251 
End bp1539318 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content49% 
IMG OID640829491 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_001365506 
Protein GI152999825 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCACAC AAACCACGCC AAATTCCTTG GCAAATCTGT TCGAAACCTA CTCGCTTAAT 
GACACTATTA CCTTAAACAA TCGTTTCTTA ATGGCGCCTT TGACCCGTTG TATGGCCGAT
GCCGACTTAG TGCCGACCGA TGACATGGTT GCCTATTATG CACGCCGCGC CGAAGCGGGT
TTGATCATCA CTGAGGCGAC CATTATTCGT CCCGATGCTC AAGGTTACCC AAATACCCCT
GGTATTTTTA CTCAAGCGCA AATTGCTGGC TGGCGCAAAG TGACCGATGC GGTACATGCC
AAAGGCGGTA AGATTTTTGT GCAGTTATGG CATACGGGCC GTGTTGCACA TCCACACTTT
TTCGGTGGTG GCGATGTGCT TGCTGCATCA GCACAGAAGA TTGAAGGCAG TGTGCCAAGA
ATGCGTGAGC TAACTTATGT CACGCCAAAA CCAGCCACAC TCGAGGATAT TCAAGGCCTA
GTGCGTGATT ACGCCAAAGC GGCGGAAAAT GCCATTGAAG CAGGTTTTGA TGGCGTTGAA
ATCCACGGTG CAAATGGTTA TTTAATTGAT ACTTTCTTAC ATCATGACAG CAATCGCCGC
ACCGATGAAT ACGGTGGCAC TCCTGCCAAT ATGTCCCGCT TTGCGCTTGA AGTTGTCGAC
GCTGTTGTGG CTCGTATCGG CAAAGACAGA ACTGGTCTGC GGATTTCACC TGGGGCTTAT
TTCAATATGG CGGCAGATAG CCGTGACCGG GAAGTGTTCG ATTACTTCTT GCCGGCACTA
GAGTCACGCG ATATCGCCTT TGTGCATATT GGGATTTTCG ATGACAGCAT GGAATTTGAT
TATCTTGGCG GCAGAGCTTC AAGCTATGTG CGCGCACACT ATGGCAAAAC CTTAGTGGGA
GTTGGAAGCT ACAGCGCTGA AACTGCCAGT GAAGCGATTG CAGCGAATAA GTTCGATTTG
ATTGCTATCG GTCGTCCATT CATTGCTAAC CCTGACTATG TTGCTCGCGT GCGTGATGGC
GTTGAACTTG TGCCTTACAG CGACGAAATG CTAGCAAGCT TAGTGTAA
 
Protein sequence
MTTQTTPNSL ANLFETYSLN DTITLNNRFL MAPLTRCMAD ADLVPTDDMV AYYARRAEAG 
LIITEATIIR PDAQGYPNTP GIFTQAQIAG WRKVTDAVHA KGGKIFVQLW HTGRVAHPHF
FGGGDVLAAS AQKIEGSVPR MRELTYVTPK PATLEDIQGL VRDYAKAAEN AIEAGFDGVE
IHGANGYLID TFLHHDSNRR TDEYGGTPAN MSRFALEVVD AVVARIGKDR TGLRISPGAY
FNMAADSRDR EVFDYFLPAL ESRDIAFVHI GIFDDSMEFD YLGGRASSYV RAHYGKTLVG
VGSYSAETAS EAIAANKFDL IAIGRPFIAN PDYVARVRDG VELVPYSDEM LASLV