Gene Shew185_1286 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1286 
Symbol 
ID5371498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1530245 
End bp1531423 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content50% 
IMG OID640829484 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001365499 
Protein GI152999818 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.49738e-09 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTAGAAA ATCGATTAGC AAAAGAAGAG AGCATGTTAA TTGCCGCAGG AGTGCTCACT 
TGGGCATTAG TGGCTTGGGT TGGGATAAAC CAAGCCGCAT TGCATACATG GCAAGGCATG
CTCAATGCCA CGCTTTATGG GCTGTATTTA GTGCAATTTA TACTGATAGC TACCGATAAA
GTTGCGCATA ACAATATTCT GTTTCGCCGC CTTGCCACAC TAGCAATGCC GTTGTTCGTG
TTGAGCTTAT TACTCACGGC AAACCATGCA TTGCTGCCGA TCCTCTTCGT TATTTGGGCG
TCACTATTGC CTGAGTTCTT TAATCGCCGC CAAGCTATTT CGCAGTTACT GTTAGCCAAC
CTTGTTTATT ACGCGCTGCT GCAATGGCAT GTGCATGAAC AAAGCAATGT ATTCAATATT
TTGATCTATC TTGGCTTTCA ATTCTTTGCC TACAGCAGCA GCCAAGCAAG GCTTTCCGAG
CGTAAATCAC GTTTGATACA AGAACAGCTA AACCAACAGC TTATCGCCAC TCGCGCCCTA
CTTAGCCAAG CCAGCGAACA GCAAGAAAGA TTGCGGATCT CCCGCGATTT GCACGACATT
CTCGGCCACC AGCTCACAGC ACTCTCTCTA CAATTAGAAG TACTGAGCCA TAAAGCGCCC
GAAGAACTCA AACCTCAAGT TAACCAAAGT AAATCCTTAG CCAAAGAGCT ACTTGAAAGT
ATTCGCGCCG TCGTCAGGGC GCAAAGAGTG CAAGTGGGAT TGGATTTAGT CCCACCTTTA
GAGGCGCTGA TGACCCGCTT ACCCAGCGTC ACTCTTACCT GCAAGACGAT GAAACCACTG
CAATCAGCCG AACAGACTCA AGCCCTGCTG TTAGTCCTGC AAGAAGGCAT CAGCAACGCA
GTGCGCCACG GCAAGGCGAA TCAACTGCAA CTGAGCATGG AAGACTCCCA AAGCGCACTG
GTATTGCAAC TGAGCGACAA CGGCGTGGGG CTAACACGGG TAGCCGCGCG AAACGTATCA
GCTAAAAGCG GTACAGGGCT AAACGGTACA GGACAGTTCG GCACAGGGCT CGGCGGCATG
CAGGAAAGAC TGCAGCCCTT TAATGGCAAG GTGCAGCTAA GGGCGAATGA CTCGGCGCCC
GGCTGCCAAC TCACTCTCAC ACTCCCTGCA CTCGCTTAA
 
Protein sequence
MLENRLAKEE SMLIAAGVLT WALVAWVGIN QAALHTWQGM LNATLYGLYL VQFILIATDK 
VAHNNILFRR LATLAMPLFV LSLLLTANHA LLPILFVIWA SLLPEFFNRR QAISQLLLAN
LVYYALLQWH VHEQSNVFNI LIYLGFQFFA YSSSQARLSE RKSRLIQEQL NQQLIATRAL
LSQASEQQER LRISRDLHDI LGHQLTALSL QLEVLSHKAP EELKPQVNQS KSLAKELLES
IRAVVRAQRV QVGLDLVPPL EALMTRLPSV TLTCKTMKPL QSAEQTQALL LVLQEGISNA
VRHGKANQLQ LSMEDSQSAL VLQLSDNGVG LTRVAARNVS AKSGTGLNGT GQFGTGLGGM
QERLQPFNGK VQLRANDSAP GCQLTLTLPA LA