Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_1280 |
Symbol | |
ID | 5371251 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 1524156 |
End bp | 1525883 |
Gene Length | 1728 bp |
Protein Length | 575 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640829478 |
Product | PepSY-associated TM helix domain-containing protein |
Protein accession | YP_001365493 |
Protein GI | 152999812 |
COG category | [S] Function unknown |
COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGTTTGCT TCAGGTGTGT GGACAGTAAG ATGAAAGAGA CATTTTTTAG AACCTTATCT TGGTTACATA CTTGGGCAGG TTTGCTCGTA TGCTGGGTGT TATTGTTGAT CTTTTTTGCG GGTAGTTTGA GCTATTTCCG CCATGAGATC AGCCTCTGGA ACGAACCCGA ATTACATCAA GGGGTTTATC AAGACTATCA AGCCGATACA CTCGCAAACC AACTTGATAA AGGCCAAGAT TATATCGCTG CGCATTCACC CGAATCGGCG CAGCGCTGGA TGATAGGTTT TCCGACCGAG CGTAAACCCT TTCAAAGTGT GAGTTGGCAA CTACCGCCAG AAAAAGGTCA ACGTCGCGGC AAGACTGAAG AACACGTTGC CCTCGCCGAT GGCAGCGGCA TGGTCGCAGA AGTGCGCGAG AGTCGCGGCG GCGATTTTTT CTATCGTCTG CACTTTGACT TGCATTATAT GTCCGCAATT ACGGCCCGAT ATATCGTCGG TGTTTGCACT ATGTTTATGC TAATTGCCCT TATCAGCGGC ATAGTGATCC ACAAGCGGAT CTTCAAGGAT TTGTTCAGTT TTAGACGCGA CAAGGGCGCC CGCTCTTGGT TAGATGCACA CAATGTGAGC TCTGTCATCG CCCTGCCCTA CCATCTGATG ATCACTTATA CCGGGCTTAT CACCCTGATG TTGATCTATA TTCCGTGGAC GGTGGATACC GCCTATTCGG GTGACAACCA AGCCTTTTTA AAAGAGCTAA ACCCCGCCAG ACAAACCGAG AAAGCCACGG GGATTAGCGC GCCACAGGTG CAGCTGAGTC AATTACTGCC GCAGGTGCAA GCCGCTTGGG GCGATGCGCC AATTAAGCAA GTGATAGTGT CATACCCTAA CGATCAAAAT AGCCAAGTGA CCTTTTACCA AAACACAGGT AAAGATGTGA CCGATGAGGC CAACATCTTG ATATTTAACG GGGTCAATGG TGAGCTTAAG TATGCCAGCC CGCATGAAGC CTCGGGAGCG TCAGTCACCT ACGACACTAT GATGTCGCTA CACACGGCGC GTTTTGCCGC CCCGCTATTA CGCATATTGT TCTTTTTCTG CGGCTTATTG GGTTGCGCTA TGGTCGCTAC AGGCACTTTG ATGTGGGCCA TTCGCCTACG CCAAAAACAA CAAAAAGCCA TAGATAAAGG CGAGAAACCA AGCTTAGGAT TACGTCTCGT CGAAGGGTTA AACTTCATGT TTATCTTAGG ATTACCTTTA GGCACGGTGA GCTTCTTTTA CGCAAACCGT CTGCTATCGA CAAGTTTTGC AGGCCGCTCC GAATGGGAAG TTCACTGCTT CTTTATCGCG TTAGCGGCAA TGGGAGTCTG GGCTTTTTTT GGCCGTTCAC GTCGCCAGTG GCAAGCAGCA TTAATACTCA CAGGCAGTTT GTGCTGTGCA CTGCCCGTGC TTAATGCCTT CACATCGCCG AGCAATCTCA TCGATAACAT CCAATCCCAT CAATGGCCTT TAGTCGGGTT TGACATGCTC GCCATTCTAC TTGGCGGCGC TATGCTATTT GCCAGCAAAA GATTAACTTT GATTGCTAAA GCTCCCGCCA AGCGCCCAGC AAGACCCGCA TTCAATACGC CGAATGCCAA GGCGAATAAG GCGCGCCGCA GCGAGCCACA AACATCCCTA GCCAACGAAC ATACCTCGCC GTCTTCATTG GAGGAAGCCA AATCATGA
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Protein sequence | MVCFRCVDSK MKETFFRTLS WLHTWAGLLV CWVLLLIFFA GSLSYFRHEI SLWNEPELHQ GVYQDYQADT LANQLDKGQD YIAAHSPESA QRWMIGFPTE RKPFQSVSWQ LPPEKGQRRG KTEEHVALAD GSGMVAEVRE SRGGDFFYRL HFDLHYMSAI TARYIVGVCT MFMLIALISG IVIHKRIFKD LFSFRRDKGA RSWLDAHNVS SVIALPYHLM ITYTGLITLM LIYIPWTVDT AYSGDNQAFL KELNPARQTE KATGISAPQV QLSQLLPQVQ AAWGDAPIKQ VIVSYPNDQN SQVTFYQNTG KDVTDEANIL IFNGVNGELK YASPHEASGA SVTYDTMMSL HTARFAAPLL RILFFFCGLL GCAMVATGTL MWAIRLRQKQ QKAIDKGEKP SLGLRLVEGL NFMFILGLPL GTVSFFYANR LLSTSFAGRS EWEVHCFFIA LAAMGVWAFF GRSRRQWQAA LILTGSLCCA LPVLNAFTSP SNLIDNIQSH QWPLVGFDML AILLGGAMLF ASKRLTLIAK APAKRPARPA FNTPNAKANK ARRSEPQTSL ANEHTSPSSL EEAKS
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