Gene Shew185_1273 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1273 
Symbol 
ID5372171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1516007 
End bp1517290 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content48% 
IMG OID640829472 
Productthreonine synthase 
Protein accessionYP_001365487 
Protein GI152999806 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0498] Threonine synthase 
TIGRFAM ID[TIGR00260] threonine synthase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.270121 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACTAT ATAATTTAAA ACACCCTTCG CAGAAAGTGA GCTTTAAAGA GGCAGTGCAA 
TTAGGTTTAG GTCAGGACAG AGGTTTGTTC TTCCCCACCC AAATTCCGGT CTTAGACGAT
ATTGAAGGGC TGCTGGCGTT GCCATTTGTT GAGCGCAGTA AAAAAGTGCT CGGTGCATGG
CTTGCCTCTG AACTAGGGCA AGATGCAGTT GATGAACTGG TTGAACGTGC CTTTAACTTC
GATTTACCTT TGGTTGCCGT CGATGAGCAG CGCGCTTGCC TCGAATTGTT CCACGGTCCT
ACTCTGGCAT TTAAAGATTT TGGTGCGCGT TTTATGGCGC AATGCGTCAA TGCCTTTGTC
GGCGACACAC GCTTAACCAT TCTGACTGCG ACTTCGGGTG ACACTGGCGC CGCGGTTGCC
GATGCCTTTT ATGGGCTTGA AAAAGTCAAT GTGGTGGTGC TCTATCCTAA GGGTAAGATC
AGTGAGCTAC AGGAAAAGAT GTTCACGACG TTGGGCAAAA ACATCCACAC AGTTGCCGTA
TCGTCCGATT TTGATGCCTG CCAAGATCTG GTTAAACGCG CCTTTGATGA TCCAGAAGTC
CGCGAGGGTT TGAGCTTGAA CTCGGCAAAC TCTATTAATA TCAGTCGCTT ACTCGCGCAA
ATTTGTTATT ACTTTGAAGC CGTTGCCCAG TCTAAACAGC GCCACGATGC CGATCCTGTG
ATTTCAGTGC CAAGTGGGAA TTTTGGTAAC CTGACGGCGG GTTTATTCGC CAAAGCCATG
GGGTTACCGG TTAAACGCTT TATCGCCGCA ACCAATGCGA ATGATACTGT GCCGCGCTAT
TTAGAAAACG GCCAATGGCA GCCCAATCAA ACCCAAGCGA CTATGTCTAA TGCGATGGAT
GTGAGTGAGC CAAGTAACTG GCCGCGAGTG GAAGCCATTT GTGAGAAATT AGCTTGGCCG
CTGAGTAACT TAGTGGGCAT GCGTTTATCT GAAGAGCAAA CTTCACTGGC ATTAGCTGAG
TTGCATGCAC AAGGTTATGT GTCTGAGCCC CATGCGGCGA TTGCAGCTAA AGCTTTGTCT
TTAACCTTAG TGCCCGATGA AGTGGGTATA TTCTTAGGTA CAGCGCATCC CGCTAAATTT
AAGGATGTGG TGGATAGAGA GCTAAATCTT AACTTACCAC TGCCGGTTGA ACTTGAGGCC
GTTGCCCACA AACCTATCTT GTCGGCTGAC TTACCCGCTG ATTTTGCGGC ACTGAAAGCG
CACTTATTCA AGATCTTAAC CTAA
 
Protein sequence
MELYNLKHPS QKVSFKEAVQ LGLGQDRGLF FPTQIPVLDD IEGLLALPFV ERSKKVLGAW 
LASELGQDAV DELVERAFNF DLPLVAVDEQ RACLELFHGP TLAFKDFGAR FMAQCVNAFV
GDTRLTILTA TSGDTGAAVA DAFYGLEKVN VVVLYPKGKI SELQEKMFTT LGKNIHTVAV
SSDFDACQDL VKRAFDDPEV REGLSLNSAN SINISRLLAQ ICYYFEAVAQ SKQRHDADPV
ISVPSGNFGN LTAGLFAKAM GLPVKRFIAA TNANDTVPRY LENGQWQPNQ TQATMSNAMD
VSEPSNWPRV EAICEKLAWP LSNLVGMRLS EEQTSLALAE LHAQGYVSEP HAAIAAKALS
LTLVPDEVGI FLGTAHPAKF KDVVDRELNL NLPLPVELEA VAHKPILSAD LPADFAALKA
HLFKILT