Gene Shew185_1258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1258 
Symbol 
ID5371767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1496868 
End bp1497959 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content47% 
IMG OID640829457 
Productphospho-2-dehydro-3-deoxyheptonate aldolase 
Protein accessionYP_001365472 
Protein GI152999791 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase 
TIGRFAM ID[TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.66728e-10 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACAAG ATACGATTAA CAACGTACAC ATTAGTTCAG AGAAAGTTTT AATCACGCCG 
CAAGAGCTTA AAAATGCCTT GCCACTTTCT GAGCATGCTT ATCGTTATAT CCTCAATGCC
CGCAAAACCG TGGCTGATAT CGTCCATAAG CGCGACAATC GAGTATTGAT CGTCACCGGG
CCTTGCTCCA TCCATGATAT CGCCGCCGCT AAGGAATACG CTTTAAGGCT TAAAACCCTG
CACGATGAAC TCAGTGATGA GTTTTACATA TTAATGCGAG TTTACTTTGA AAAGCCGCGT
ACCACGGTAG GTTGGAAAGG CATGATCAAC GATCCCGATA TGGATGAATC CTTCGATGTC
GAAAAAGGTC TGAAAATGGC CCGTGAGCTG ATGATTTGGT TGGCCGAATT AGGGCTACCA
GTCGCCACTG AAGCGCTTGA TCCTATCAGC CCTCAGTACA TTTCTGAGCT AGTGACTTGG
TCGGCCATCG GTGCCCGCAC CACTGAATCG CAAACCCATA GGGAAATGGC ATCGGGTCTT
TCTATGCCAG TTGGCTTTAA AAATGGCACC GATGGTAAGC TCGATGTCGC GATTAATGCG
CTAAAATCGG CGGCCAGCAG TCACAGATTT ATGGGTATTA ACCAACAGGG CCAAGTCGCC
TTATTACAAA CTGCGGGCAA TCCCGATGGT CATGTGATTT TACGCGGCGG CGCAACACCC
AACTACGATG CCGCAAGCGT GGCTGAATGT GAGGCGCAGC TTCATAAAGC CAAACTCAAT
GCACGTTTGA TCATCGATTG CAGCCACGGC AATTCATCCA AAGACTACAG CCGCCAAAAG
CCTGTGTGTG AAGATGTGTT CGAGCAGATT TATAACGGCA ATAAATCGAT CATCGGCGTT
ATGCTTGAAA GCCATTTAAA TGAAGGCAAT CAAAGCTGTG ATAAGCCATT AAGCGAGCTA
GCTTACGGTG TATCTGTGAC AGATTCCTGT ATTAACTGGG AAAAAACAGA AACCATTTTA
CGTGACGGCG CGGTGAAGTT ATCTTCAATA CTCCCAGCAC GCTTCGATAT GCTTAAAGTA
GCTAACGCTT AA
 
Protein sequence
MQQDTINNVH ISSEKVLITP QELKNALPLS EHAYRYILNA RKTVADIVHK RDNRVLIVTG 
PCSIHDIAAA KEYALRLKTL HDELSDEFYI LMRVYFEKPR TTVGWKGMIN DPDMDESFDV
EKGLKMAREL MIWLAELGLP VATEALDPIS PQYISELVTW SAIGARTTES QTHREMASGL
SMPVGFKNGT DGKLDVAINA LKSAASSHRF MGINQQGQVA LLQTAGNPDG HVILRGGATP
NYDAASVAEC EAQLHKAKLN ARLIIDCSHG NSSKDYSRQK PVCEDVFEQI YNGNKSIIGV
MLESHLNEGN QSCDKPLSEL AYGVSVTDSC INWEKTETIL RDGAVKLSSI LPARFDMLKV
ANA