Gene Shew185_1249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1249 
SymbolacpS 
ID5372258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand+ 
Start bp1489396 
End bp1489779 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content54% 
IMG OID640829448 
Product4'-phosphopantetheinyl transferase 
Protein accessionYP_001365463 
Protein GI152999782 
COG category[I] Lipid transport and metabolism 
COG ID[COG0736] Phosphopantetheinyl transferase (holo-ACP synthase) 
TIGRFAM ID[TIGR00516] holo-[acyl-carrier-protein] synthase
[TIGR00556] phosphopantethiene--protein transferase domain 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0121118 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGATTG TCGGCCTAGG CACAGATATC GTCGAGATTG AGCGTATTCA GGCGCATGTG 
GCGCGCGCAG GCGACAAGCT GGCGAAACGT GTGCTGACCG AGGCTGAGTT GGCCATTTAT 
ACTGCCCATA GTCAGCCAAG CCGTTATCTT GCCAAGCGTT TTGCCGCCAA AGAAGCTGCA 
GCCAAAGCGC TTGGTACGGG CATTGGCCGC GGCGTGTCGT TCCAGCATAT TCACATTGGC 
AACAATGAGG ATGGTGCGCC GACGATTCAC TTTACCGAGG GGGCGCTTAC GCGCTTACAG 
CAGCTTAAAG CGACAGTTGG GCATATCTCC ATTGCCGATG AAAAATCCTA TGCGATTGCG 
ACGGTAATCA TAGAGTCTCA ATAA
 
Protein sequence
MAIVGLGTDI VEIERIQAHV ARAGDKLAKR VLTEAELAIY TAHSQPSRYL AKRFAAKEAA 
AKALGTGIGR GVSFQHIHIG NNEDGAPTIH FTEGALTRLQ QLKATVGHIS IADEKSYAIA 
TVIIESQ