Gene Shew185_1243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1243 
Symbol 
ID5370536 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1483264 
End bp1485054 
Gene Length1791 bp 
Protein Length596 aa 
Translation table11 
GC content45% 
IMG OID640829442 
ProductGTP-binding protein LepA 
Protein accessionYP_001365457 
Protein GI152999776 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0481] Membrane GTPase LepA 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR01393] GTP-binding protein LepA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value5.10522e-09 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACAAA TTAGAAACTT CTCAATTATT GCCCATATCG ACCATGGTAA ATCGACGCTA 
TCAGATCGTC TTATTCAGGT TTGTGGCGGT TTAACCGACC GTGAAATGGA TGCTCAAGTT
TTAGATTCTA TGGATCTAGA ACGTGAGCGT GGTATTACGA TTAAGGCACA AAGTGTCACT
TTGGATTACA AAGCTAAAGA TGGCCTTGTC TATCAACTCA ACTTTATTGA TACCCCAGGT
CACGTTGACT TCTCCTATGA GGTCTCGCGA TCATTAGCAG CCTGTGAAGG CGCTTTGCTG
GTGGTTGATG CGGGTCAGGG CGTTGAAGCT CAGACACTGG CAAACTGTTA CACCGCGCTG
GATATGAATC TAGATGTGGT ACCTATTTTA AACAAGATTG ACTTACCACA AGCCGATCCA
GAACGTGTTG CTGCCGAGAT TGAAGATATC GTCGGTATCG ATGCCATGGA TGCTGTGCGT
TGCTCGGCTA AAACCGGTGT CGGTGTCGAC GAGGTTTTAG AAGTCATTGT TGCCAAAATT
CCACCGCCAG AAGGCGATCC TAACGCACCA TTGCAAGCCT TGATCATCGA TTCTTGGTTT
GATAACTACC TAGGCGTAGT GTCTTTAGTG CGAATTAAAC ACGGTAGCCT GAAAAAAGGT
GACAAGTTTA AGGTGATGTC TACAGGACAA AACCACACTG CAGATCGCGT CGGTATTTTC
ACCCCAAAAC AAACTGATAA AACCGAACTT AAAACCGGTG AAGTAGGCTT TGTGATTGCG
GGTCTGAAAG AAATTCACGG CGCGCCTGTG GGCGATACAT TAACTTTAGC CAAAAACGGT
GCTGAAAAGC CGTTACCTGG TTTTAAGAAA GTGAAGCCAC AGGTATACGC TGGCGTATTC
CCGATTTCTA CCGACGAATA TGAAAACTTC CGTGATGCGC TGAATAAGCT CAGCCTGAAC
GATGCGTCAT TATTCTTCGA ACCAGAAAGT TCATCGGCAC TCGGTTTTGG TTTCCGCATT
GGCTATTTAG GCCTGCTGCA CATGGAAATC GTCCAAGAGC GTTTAGAGCG TGAATACAAC
CTAGAGTTGA TCACTACAGC GCCAACCGTA GTGTACGAAG TGGTGATGAC CAGCGGTGAA
ACGATTTACG TTGATAACCC GTCTGATCTA CCAGCGATTA ACAACATCGA AGAAATGCGT
GAGCCGATTG TTGAGGCCAA CATTTTAGTG CCAAAAGAAT ACTTAGGTAA CGTGATTACC
TTGTGTATTG AAAAACGTGG CACGCAAGTG AACATGGTTT ACCACGGTAA CCAAGTGGCT
GTGACGTATC ATCTGCCAAT GGCGGAAGTG GTCATGGACT TCTTCGACCG TTTGAAATCC
ACTAGCCGTG GTTATGCATC ACTCGAATAT AACTTTATTC GTTTCGATCC TGCAGACATG
GTGCGTTTAG ATATTCTCAT CAACGGCGAC AGAGTTGATG CCTTGGCTAT GGTTATCCAT
AGATCCAACA TTCGTCACCG TGGTTTAGCC TTAGTCGATA AGATGAAAGA GCTGATCCCG
CGTCAGATGT TTGATATCGC GATTCAAGCG GCTGTGGGCA GTCAAATTAT TGCTCGTTCA
ACCGTGAAAG CCCTGCGTAA AGACGTAACG GCTAAATGTT ATGGCGGCGA CGTTTCTCGT
AAGAAAAAAC TCTTAAATAA ACAAAAAGAG GGTAAGAAAC GGATGAAGCA AGTGGGTAAC
GTTGAGGTGC CACAGGAGGC ATTCTTAGCG GTACTTAAGC TAAACGAGTA A
 
Protein sequence
MKQIRNFSII AHIDHGKSTL SDRLIQVCGG LTDREMDAQV LDSMDLERER GITIKAQSVT 
LDYKAKDGLV YQLNFIDTPG HVDFSYEVSR SLAACEGALL VVDAGQGVEA QTLANCYTAL
DMNLDVVPIL NKIDLPQADP ERVAAEIEDI VGIDAMDAVR CSAKTGVGVD EVLEVIVAKI
PPPEGDPNAP LQALIIDSWF DNYLGVVSLV RIKHGSLKKG DKFKVMSTGQ NHTADRVGIF
TPKQTDKTEL KTGEVGFVIA GLKEIHGAPV GDTLTLAKNG AEKPLPGFKK VKPQVYAGVF
PISTDEYENF RDALNKLSLN DASLFFEPES SSALGFGFRI GYLGLLHMEI VQERLEREYN
LELITTAPTV VYEVVMTSGE TIYVDNPSDL PAINNIEEMR EPIVEANILV PKEYLGNVIT
LCIEKRGTQV NMVYHGNQVA VTYHLPMAEV VMDFFDRLKS TSRGYASLEY NFIRFDPADM
VRLDILINGD RVDALAMVIH RSNIRHRGLA LVDKMKELIP RQMFDIAIQA AVGSQIIARS
TVKALRKDVT AKCYGGDVSR KKKLLNKQKE GKKRMKQVGN VEVPQEAFLA VLKLNE