Gene Shew185_1227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1227 
Symbol 
ID5370863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1468500 
End bp1469171 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content50% 
IMG OID640829426 
ProductDNA mismatch repair protein 
Protein accessionYP_001365441 
Protein GI152999760 
COG category[L] Replication, recombination and repair 
COG ID[COG3066] DNA mismatch repair protein 
TIGRFAM ID[TIGR02248] DNA mismatch repair endonuclease MutH 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value9.90302e-12 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCGAA TTATTCCCCC CGAAAATCTC CCTGAGCTAC TCGAGCGCGC CCATATGATG 
GCTGGCGTGA GTTTAGCGCA AATTGCCGCC CAAAGAGGCC TAAGTGTCCC TAAGGATCTT
AAGCGGGATA AAGGCTGGGT TGGACAGTTA ATCGAAATGG AACTGGGCGC GACGGCAGGT
TCTAAACCTG AGCAAGATTT TCTGCATTTA GGTGTAGAGC TTAAAACTAT CCCCATCGAT
TCACAGGGAC GACCATTGGA GACCACCTAT GTTTGCGTGG CGCCGCTGTC GAATATCCAA
GGGTTAACCT GGCAAAACAG CTTAGTCTGT CATAAGTTAC AGCGCGTCCT TTGGGTACCC
GTTGAAGGTG AGAGGCATAT TCCTGTGGCT GAGCGCCGCA TCGGCACCCC GATATTGTGG
GAGCCTGATC CACAGGAGTT GCAATTGCTG CAACAGGATT GGGAAGAGAT CATGGAGCTT
ATCGCCCTCG GCAAAGTCGA AAAACTCACC GCACGCCACG GCGAAGTACT GCAATTACGT
CCCAAAGCCG CCAACAGTAA AGCATTAACG CAAAGCATTG CCGAAGATGG CAGCCTCAAA
ATGACTAACC CTAGGGGCTT TTATTTAAAG ACCAGTTTCA CCGCCATGAT ACTTAATAAG
GTTTTTGGTT AA
 
Protein sequence
MNRIIPPENL PELLERAHMM AGVSLAQIAA QRGLSVPKDL KRDKGWVGQL IEMELGATAG 
SKPEQDFLHL GVELKTIPID SQGRPLETTY VCVAPLSNIQ GLTWQNSLVC HKLQRVLWVP
VEGERHIPVA ERRIGTPILW EPDPQELQLL QQDWEEIMEL IALGKVEKLT ARHGEVLQLR
PKAANSKALT QSIAEDGSLK MTNPRGFYLK TSFTAMILNK VFG