Gene Shew185_1217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1217 
Symbol 
ID5372644 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand- 
Start bp1454949 
End bp1455575 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content51% 
IMG OID640829416 
Producthypothetical protein 
Protein accessionYP_001365431 
Protein GI152999750 
COG category[S] Function unknown 
COG ID[COG2860] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.595992 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCAGT GGATCTACTT TTTTGATTTA TGGGGTACCG CTGTATTTGC GCTATCTGGC 
GCACTTGCCG CTGGACGCCA TAGAATGGAC CCCTTTGGCG TAATCGTGCT CGCCTCGGTT 
ACCGCTGTCG GTGGTGGCAG TATTCGTGAT GCCTTAATTG GTGCAACGCC AGTGTTCTGG 
ATCCGCGACC CGAATTACAT CATAGTGATC CTCGCAACTG TGCTCGCCTG TTTGCTATTA 
GTCCGTCGCC CTCGTAAGGT ACCCGAGTAT ATTTTACCCG TCGCAGATGC CTTTGGATTG 
GCCTTGTTTA CTGTGATTGG TGCCGAAAAA GCCCTCAATA TGGGCTTAAG TGGCATGATT 
GCCGTGGTTA TGGGCTTGAT CACAGGCGTG GGAGGAGGCA TTATTCGAGA CTTACTGTGC 
AGACAAGTTC CTATGGTGTT ACGTACAGAA GTCTATGCCA CAGCTTCAAT CATTGGTGGT 
ATCGGCTATA CCGTGAGTTT AGCCTACGGT ATGGGCGAGA AAACGGCGCT GTTTCTGGCG 
ATGACCAGTG CCCTATTTAT CCGCTTAAGC GCCATCAAGT GGCATCTGTC GTTACCGGCC 
TTTGATCTCA AAACCAAGAG GGAATAG
 
Protein sequence
MSQWIYFFDL WGTAVFALSG ALAAGRHRMD PFGVIVLASV TAVGGGSIRD ALIGATPVFW 
IRDPNYIIVI LATVLACLLL VRRPRKVPEY ILPVADAFGL ALFTVIGAEK ALNMGLSGMI 
AVVMGLITGV GGGIIRDLLC RQVPMVLRTE VYATASIIGG IGYTVSLAYG MGEKTALFLA 
MTSALFIRLS AIKWHLSLPA FDLKTKRE