Gene Shew185_1213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1213 
Symbol 
ID5371345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1451084 
End bp1452490 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content45% 
IMG OID640829412 
Productpeptidase M23B 
Protein accessionYP_001365427 
Protein GI152999746 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0214324 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAAAGG TTATAACGTT ATTTAAATTG TTGCCTAAAA AGCATCAAAT TCTCCTCAGC 
ATTCTTTCAG TTATCACCAT GATAACCATG CTACTCCCTT CTGAAGAAGC GCAAGCTTCA
AGACAAACCA CTAGCATTGA TGACCAAGCT CAAATCAACA CCCGTTATGA TGTGCCTTTA
GCGTTTCGCT CGCCTGAACG TCCAGAGTTA TTAGAGGGCC AAACAGACAA TGCGCCCACC
AATGCTGCGC CATTATCGTC AACCGACGTG CTTGCCGCGG GTGATGCTAA TAATCCAGCG
ACAGAATCCC TCGAAAGTGC CCATCACAGG GACGTCGAAC ATTTTAACGT GAAAAACGGT
GACACCTTAG CCGCAGTATT TGATCGCGCA GGATTAACCA GTAAAGACGT GTATGAAATC
ACCCAACTCC CCTTGGCCAA ACAAAACTTA CTTAAGATTA TGCCAGGCGA AGAAATCGTG
ATTTCAAAGG ATGTTAATGG TGATTTGACC GAAGTGCGTT ATCGCGTCAA TGCAATTTCA
ACCTTAGTGA TTACTAAGAA TCAAGAGCAA TACCAAGAAA AAATCTCTGA GAAGGATGTG
GAAATTCGCA GCCATTTCAC CAGTGCTAAG ATTAAGAGCA ACTTCTGGAA CGCCGCCGTC
GATGCAGGCA TGAGTGCAAA TCAGATCATG CAATTATCGA CCGTATTTGG CTGGGACATC
GACTTCGCCT TAGATTTACG CGAAGGCGAC AACTTTGCCA TTATTTATGA GCAAGAATAT
GCCGATGGTG AATTTTTGCG TAACGGCAAT ATCTTAGCCG CAGAATTTGT TAACCAAGAT
GAGCGCTATA CCGCCATTCG CTATACCGAC GGCAACTATT ATTCCGAAAA TGGCACTAGC
ATGCGTAAAG CCTTCTTACG CTCACCAGTC GATTTTAAAT ATGTCAGTTC CAACTTTAAT
CCAAGGCGTT TACACCCAGT AACGGGCCAA GTAAAAGCCC ATCGTGGTGT GGATTATGTC
GCCGCCATTG GCACACCCAT TAAAGCGGCG GGGAGCGGAC GCGTCATCGA AGCGGGCTAC
AATCAATTCA ACGGTAACTA TGTGTTTATC AAACACAACG ATACCTATAC CACCAAATAT
CTTCACCTCA CGAAGCGCAA CGTCAGCAAA GGAGCCAGCG TTAAGCAAGG GCAAATCATA
GGTACATTAG GTAAAACGGG GCGCGTCACG GGTGCGCATT TGCATTACGA ATTTATCGTC
AATGGCGTCC ACCGCAACCC AAGAACCATA ACGCTACCTA AAGCCGAATC AATTGCGAGA
AAAGAAAAAC ATCAATTTGA TGCACTCAGC CAGCAATTGA TGACTACACT TTCGCAAAAC
AAGCAAACGC AATTGGCAAT GCAATAA
 
Protein sequence
MGKVITLFKL LPKKHQILLS ILSVITMITM LLPSEEAQAS RQTTSIDDQA QINTRYDVPL 
AFRSPERPEL LEGQTDNAPT NAAPLSSTDV LAAGDANNPA TESLESAHHR DVEHFNVKNG
DTLAAVFDRA GLTSKDVYEI TQLPLAKQNL LKIMPGEEIV ISKDVNGDLT EVRYRVNAIS
TLVITKNQEQ YQEKISEKDV EIRSHFTSAK IKSNFWNAAV DAGMSANQIM QLSTVFGWDI
DFALDLREGD NFAIIYEQEY ADGEFLRNGN ILAAEFVNQD ERYTAIRYTD GNYYSENGTS
MRKAFLRSPV DFKYVSSNFN PRRLHPVTGQ VKAHRGVDYV AAIGTPIKAA GSGRVIEAGY
NQFNGNYVFI KHNDTYTTKY LHLTKRNVSK GASVKQGQII GTLGKTGRVT GAHLHYEFIV
NGVHRNPRTI TLPKAESIAR KEKHQFDALS QQLMTTLSQN KQTQLAMQ