| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1199 |
|---|
| Symbol | |
|---|
| ID | 5373646 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | - |
|---|
| Start bp | 1435691 |
|---|
| End bp | 1436941 |
|---|
| Gene Length | 1251 bp |
|---|
| Protein Length | 416 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640829398 |
|---|
| Product | polynucleotide adenylyltransferase/metal dependent phosphohydrolase |
|---|
| Protein accession | YP_001365413 |
|---|
| Protein GI | 152999732 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAAATAT ATCTCGTCGG CGGTGCTGTG CGTGACAGCC TGCTCAATCT CCCTATCAAG
GACAAAGATT ACCTCGTCGT TGGTGCGACT CCAGAACAAA TGTTGCAACT GGGATACCGC
CAGGTCGGTA AAGATTTCCC GGTATTTCTG CATCCTAAAA ACCAACAAGA ATATGCGTTA
GCCCGAACAG AGCGAAAAAT TGGACTGGGT TATGGTGGTT TTAGCTGCCA TGCCAGTCCC
GATGTGACTT TAGAGCAAGA CTTGTTACGT CGAGATCTGA CCATTAATGC TATCGCCCAA
GATGAAAAGG GCAACTTATA CGATCCTTTT AATGGCATTG AGGATATTAA CGCGCGCCTA
TTGCGCCATG TGTCGGATGC TTTCGTTGAA GATCCGCTTC GCGTATTGCG TGTCGCCCGC
TTTGCCGCAA GGTTTCATGC CTTAGGATTT CACATTGCCG CAGAAACTCT GGCACTGATG
CGCCAAATTA GCGCAAGCGA TGAGCTTAAC GCGTTAACCG CGGAGCGAGT TTGGCAAGAA
GTCGATAAAA GCTTAGGCGG ACCTCACCCT GAGGTCTTTT TCGAGGTACT GCACCAATGC
GGTGCCCTTG AAGTACTCTT TCCCGAGATT TTTGCCTTAT TTGGCGTTCC TCAACCAGAA
AAATGGCATC CTGAAATTGA TACTGGTGTG CATACTTTAA TGGTGCTCGC CCAAGCCGCT
CTTCTCACTG AGGATAAAAG CGTTCGTTTT GCCGCTCTCG TACATGATTT AGGCAAAGCC
CTCAGTCCAA AAGAGCATTT ACCTAAACAT CACGGTCACG GCCAAAAGGG CTTACCGCTG
ATAAAAGCGC TCTGCACCCG TTTACGAGTG CCGAACGAAA CCCGCGATCT TGCGTTACTG
GTCAGTGACC AACATCAGAA CGTTCATCAG GCCTTCGAGC TTAGAGCCGA AACGATCGTA
AAAATATTCG ATAAAGCTGA CTTTTGGCGT AAGCCAGAGC GCTTGACGCA ACTTATATTA
GCCTGCACCG CCGATATGCG TGGTCGAACA GGATTTGAAA ACAACCTCTA CCCTCAGGGT
GAATATTTAA CTCAATGCTT CCTTGCCGCC AATAATGTCG ATATTGCCGC CATTATTGCC
GCAGGTTTCC AAGGCGCAGA GATAAAGCAG GCGTTAAATT TACGTCGTAT TGAAGCGGTC
AGTCAGTTTA AACAAAAAAT GCAAACTAAA CTGCCGACGG ATGAACGGTA A
|
|---|
| Protein sequence | MKIYLVGGAV RDSLLNLPIK DKDYLVVGAT PEQMLQLGYR QVGKDFPVFL HPKNQQEYAL
ARTERKIGLG YGGFSCHASP DVTLEQDLLR RDLTINAIAQ DEKGNLYDPF NGIEDINARL
LRHVSDAFVE DPLRVLRVAR FAARFHALGF HIAAETLALM RQISASDELN ALTAERVWQE
VDKSLGGPHP EVFFEVLHQC GALEVLFPEI FALFGVPQPE KWHPEIDTGV HTLMVLAQAA
LLTEDKSVRF AALVHDLGKA LSPKEHLPKH HGHGQKGLPL IKALCTRLRV PNETRDLALL
VSDQHQNVHQ AFELRAETIV KIFDKADFWR KPERLTQLIL ACTADMRGRT GFENNLYPQG
EYLTQCFLAA NNVDIAAIIA AGFQGAEIKQ ALNLRRIEAV SQFKQKMQTK LPTDER
|
|---|
| |