Gene Shew185_1196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1196 
Symbol 
ID5371069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1432808 
End bp1433608 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content46% 
IMG OID640829395 
Productundecaprenyl pyrophosphate phosphatase 
Protein accessionYP_001365410 
Protein GI152999729 
COG category[V] Defense mechanisms 
COG ID[COG1968] Uncharacterized bacitracin resistance protein 
TIGRFAM ID[TIGR00753] undecaprenyl-diphosphatase UppP 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.38552 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATACGT TTCAGGTCAT TATTTTAGCG CTTATTCAAG GGCTAACCGA GTTTTTACCT 
ATTTCTAGTT CTGCGCACTT AATTTTACCC GCACAGCTTT TAGGCTGGGA AGATCAAGGT
TTATCCTTCG ATGTGGCGGT GAATACAGGT TCGTTATTTG CTGTGGTAAT TTATTTCAGA
CACGAGTTAT GGACTATGTT TAATGCTTGG ATTGCGAGCA TTTTCAGAGG TCAACAATCC
GAAGACAGCA AGCTGGCGTG GTGGATTATT CTGGCGACCT TGCCAGCGGT ATTTTTTGGT
TTTCTGGCAA AGGATTTTAT CGCGACTCAC CTACGTAACG CTGAGGTCAT CGCGGTCACT
ACCGTCGTAT TTGGTTTATT GTTGTGGTGG GCCGATAAGA TGTCGCGCCG CGATTTAACG
GTTTATCAGA CGGGCTGGCG TAAAGCCTTG TTAATTGGTT TCGCGCAGGC ATTGGCCTTG
ATCCCGGGGA CTTCGCGCTC TGGTGCCACT ATGACAGCGG CGCTAATGTT AGGCTTAAGT
CGTGATGCAG CGGCCCGCTT TTCATTCTTA ATGTCAGTTC CTGTGAGTTT AGGTGCGGCG
ATTTTAGTGG GTAAAGATCT GGCGAAAAGT GAGCTTCCGA TTGATTATCA AGCGTTAATC
CTAGGAACTC TGATTTCGTT TGTTGCAGCT TATGCCTGTA TTCATTACTT CTTAAAAATC
ATCAGCCGCA TGGGAATGAC CCCGTTTGTG ATCTATCGTT TAGCACTCGG TGCAGTCTTG
TGTGGATTTA TCTTCTTCTA G
 
Protein sequence
MDTFQVIILA LIQGLTEFLP ISSSAHLILP AQLLGWEDQG LSFDVAVNTG SLFAVVIYFR 
HELWTMFNAW IASIFRGQQS EDSKLAWWII LATLPAVFFG FLAKDFIATH LRNAEVIAVT
TVVFGLLLWW ADKMSRRDLT VYQTGWRKAL LIGFAQALAL IPGTSRSGAT MTAALMLGLS
RDAAARFSFL MSVPVSLGAA ILVGKDLAKS ELPIDYQALI LGTLISFVAA YACIHYFLKI
ISRMGMTPFV IYRLALGAVL CGFIFF