Gene Shew185_1184 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1184 
Symbol 
ID5373494 
Type 
Is gene splicedNo 
Is pseudo geneYes 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1417151 
End bp1418446 
Gene Length1296 bp 
Protein Length 
Translation table 
GC content46% 
IMG OID640744668 
Product 
Protein accession 
Protein GI 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0738] Fucose permease 
TIGRFAM ID[TIGR01272] glucose/galactose transporter 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value7.35175e-05 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTATTG CAAATGAAAC TGAGGCGAGT TCGGTGAGTG AGGCAGCAAC GAGTGTGCAC 
CAGAGTGGCA ACTTTAGGTT CGCTTTAGTG GCATTAACAT CGTTGTTTTT CATGTGGGGA
TTCATTACTT GTCTTAACGA TATCTTAATA CCTTATTTAA AAAACATGTT TGAGCTGAAT
TACGCCCAAG CCATGTTGGT GCAGTTTTGT TTTTTTGGGG CTTACTTTAT TGTCTCAATC
CCAGCGGGTG CACTTGTGGG TAAGATTGGT TATCAAAAAG GCATAGTCAC TGGGCTTGGT
ATTGCGTGTT TAGGCTGCTT ATTATTTTAT CCTTCAGCGA GTTTCGCTTC GTATTGGATG
TTCCTAGGCG CTTTTTTTGT TTTAGCCTCT GGCATTACCA TTCTGCAAGT GGCGGCTAAT
CCCTACGTCA GCGTGCTGGG ACCTGCAAAA ACCGCGTCAT CAAGACTCAC TCTGACCCAA
GCGTTTAATT CCTTTGGCAC CACAGTTGCC CCGTTTTTTG GTAGTTGGTT GATTTTATCG
ACTTCACATC AAATGACAGG AGAGGCTGCT CCTGACCTTG TAGTCAGCAC TGCGGCCCAA
GCGAGCACAG TACAAGTTCC CTATTTGATT TTAGCGGCCA GTTTATTTGT GCTGGCGGTG
ATTTTTATAC TGTTAAAGCT GCCTTTTTTA GGTAAAAAAC TGCCTGCGAG CAGTGCTAAA
GTGCTGGGCA GTGCATGGCA ATTTCCGCAT CTTGTTCTCG GTAGCGTGGG GATTTTTGTG
TATGTGGGGG CCGAAGTCGC CATTGGCAGT TTTTTGATTA GCTTTCTAGT TCAGCCCGAT
ATTGGCGGTT ACACTCACGC CGAAGCTGCA CATTACATTG CCTACTATTT TGGCGGCGCT
ATGGTTGGGC GTTTTATTGG CGCGGCCGTG ATGTAAAAAA TCAAGGCCGG CAAAGTGTTA
GCCTTTAATG CGATTTGTGC TTGCCTGCTG GTGGCCTTAG CCATGTTTAG TACGGGGGCT
ATGGCAATGT GGGCCTTACT GTTAGTCGGG TTATGTAACT CTATTATGTT CCCGACGATT
TTCAGCTTGG CATTACAAAA TCTTGAACAA CACACCAGCC AAGGTTCAGG CATTTTATGT
TTGGCGATTG TGGGCGGCGC GATTGTGCCC TTATTTCAAG GTATGTTAGC CGATCATTTT
GGTATCCAAT TGGCCTTTAT CTTACCGCTG CTTTGTTATG GTTTTATCGC CTATTACGGG
GCTAAGGGCT GTGATGCCCC AAGACCAAGA TTTTAA
 
Protein sequence