| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1182 |
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| Symbol | |
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| ID | 5372746 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 1414192 |
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| End bp | 1415517 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640829381 |
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| Product | sugar (glycoside-Pentoside-hexuronide) transporter |
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| Protein accession | YP_001365397 |
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| Protein GI | 152999716 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
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| TIGRFAM ID | [TIGR00792] sugar (Glycoside-Pentoside-Hexuronide) transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.020658 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTAGCA TAAAAGAAAA AATAGCCTAT GGGCTTGGCG ACACTGCCAG CAACATCGTT
TTTCAAACCG TTATGCTGTT CCTTACCTTT TTTTACACCG ACATTTTTGG TATTTCACCC
GCCTTTGTCG GCACTATGTT TCTACTGGTA CGATTGATTG ATGCCGTCAC CGATCCTTTA
ATGGGTGCAT TGGCTGACCG CACGAACACC CGTTGGGGTA AATTCAGACC CTATTTACTC
TGGTTTGCCC TGCCCTTTGG GATTATCAGT GTATTGGCTT TTACGACCCC AGATTTAACT
GAAGATGGGA AAATGATTTA TGCCTTCGTG ACTTACACTG CATTGATGAT GGTATATACC
GCCATTAATA TTCCCTATTG CGCCTTAGGT GGAGTACTGA CGGCCGATCC CAAAGAGCGG
GTTTCGGTGC AATCCTATCG GTTTGTGTTC GCTATGCTCG GTGGCTTACT TGTCTCAGGA
CTCACCCTGC CTCTCGTCGA ATTTCTCGGT AAAGGTGACC AAGCAAAAGG GTATCAGCTC
ACGATTCTCG CCATGAGTAT CTTAGGCGTT GCCATGTTTT TGGCCTGCTT CTGGGGCACA
AAAGAGCGCT TACATCCGCC CGTGGATCAA AATTCCAGCT TTAAACAGGA CTTTACCTAT
CTATTACAAA ATGACCAATG GCGAGTGTTA TCCGCCGCTG CAGTTTGCCT ATTATCCGGC
ATGGTATTGC GCACTAGCCT CGCCATTTAC TACGTAAAAT ATTTTCTTAA CCTGCCAGAT
ATGATCACTC TTTTCATCAC CTTAGGCATG GTGGGCAACG TTTTTGGCTG TATTCTCGCA
GAGCCATTAG CCAAGCGCGT TTGTAAGGTT AAAGCCTATA TCGTGTTGCA AATTCTAGCC
GCGACCCTGT GTGTACTGCA CTTTTTTGTC CTTAAAGATC AAGTCGTTCT CGCCTTCACT
CTTTATATTG TCTGGGGATT TACCTTCAAT ATGGCCACCC CATTACTCTG GGCGAAAATG
GCAGATACAG TCGATTATGG TCAATACAAA ACCGGCGTGC GTATCACAGG CATGATTTAC
TCCTCGGTGA TTTTCTTTAT CAAGCTTGGA GTCGCGATTG GCGGTGCGGC GGCTGGATGG
TTACTAGCAA GTTATGGCTA TCAAGCCGAT GCCGTTCAGA GTGAAACGAC GCTCAATGGC
ATCTTAATTT CATTTACCCT TTATCCCGCT ATCGGCTCAA TTTTGGTCGC ATTTATCATG
CGTCGTTATA CGCTAAATAA CCAGAAAGTG GATGAAATCC ATCTGGAATT AAATAGAGCC
AGCTAA
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| Protein sequence | MISIKEKIAY GLGDTASNIV FQTVMLFLTF FYTDIFGISP AFVGTMFLLV RLIDAVTDPL
MGALADRTNT RWGKFRPYLL WFALPFGIIS VLAFTTPDLT EDGKMIYAFV TYTALMMVYT
AINIPYCALG GVLTADPKER VSVQSYRFVF AMLGGLLVSG LTLPLVEFLG KGDQAKGYQL
TILAMSILGV AMFLACFWGT KERLHPPVDQ NSSFKQDFTY LLQNDQWRVL SAAAVCLLSG
MVLRTSLAIY YVKYFLNLPD MITLFITLGM VGNVFGCILA EPLAKRVCKV KAYIVLQILA
ATLCVLHFFV LKDQVVLAFT LYIVWGFTFN MATPLLWAKM ADTVDYGQYK TGVRITGMIY
SSVIFFIKLG VAIGGAAAGW LLASYGYQAD AVQSETTLNG ILISFTLYPA IGSILVAFIM
RRYTLNNQKV DEIHLELNRA S
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