| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1154 |
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| Symbol | |
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| ID | 5370826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 1376024 |
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| End bp | 1376749 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640829353 |
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| Product | regulatory protein GntR HTH |
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| Protein accession | YP_001365369 |
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| Protein GI | 152999688 |
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| COG category | [K] Transcription |
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| COG ID | [COG2186] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.161045 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGCATATCT TCAAGCCAAT TAAGCAGATA AAAGCATCGA GTGAGGTTGG GCAGCAACTG
AAAAATGCTA TTTTAGGTGG CGAATATAGA GCGGGTGATA AACTGCCTTC CGAGCGTGAA
TTGATTGAGC TATTCCAAGT GAGTCGCACT GTCGTCAGAG AAGCAATCAA GAGCATTGAA
GCGAGTGGAT TAGTCGAAAT TCGCCAAGGA GCAACGGGTG GCGCATTTGT TAAACACTTA
ACCTTTGAGC GATTAAGTGA TGCCTGCAAT GACTTGTTTA TGATGGGTAA ACTTTCACTA
CCAGAGTTAT GTCAGGCACG TATGCTGATT GAGCCACAAG TAGCGAGAAT GGCCGCCCGA
AATTGCACAC CGGAGCAAGC TTTAGCGCTA ATTGAGGCCA ATAGTCATGA AAATGATTCA
TACGCTTATC CAGATACCGT CGCCTTACGT TCAGAGGTGC ATTATTTATT AGCTGAAATG
GCAGGCAACC GTTTTCTCGA GGCAATCGTT AAATCATTAT TGATTTTATT ACGTAATCAG
ACGATTAAAT TTGAACCACC AACAGATGAA ATCCATCCAC TAGGGTTACA TGGTGTGATT
ATTGACGCTG TGATCGCCAA TGATGAAGAT AAAGCTGAAG CAGAGATGTT TGCGCACTTA
GAAGATTTTA ATATACGCCT TCGAAAAATT GAGTGTAAAT ACTTAGATAA ACAGCGTAGT
TTATAG
|
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| Protein sequence | MHIFKPIKQI KASSEVGQQL KNAILGGEYR AGDKLPSERE LIELFQVSRT VVREAIKSIE
ASGLVEIRQG ATGGAFVKHL TFERLSDACN DLFMMGKLSL PELCQARMLI EPQVARMAAR
NCTPEQALAL IEANSHENDS YAYPDTVALR SEVHYLLAEM AGNRFLEAIV KSLLILLRNQ
TIKFEPPTDE IHPLGLHGVI IDAVIANDED KAEAEMFAHL EDFNIRLRKI ECKYLDKQRS
L
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