| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1122 |
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| Symbol | lspA |
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| ID | 5370421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 1336551 |
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| End bp | 1337066 |
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| Gene Length | 516 bp |
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| Protein Length | 171 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640829321 |
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| Product | lipoprotein signal peptidase |
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| Protein accession | YP_001365337 |
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| Protein GI | 152999656 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0597] Lipoprotein signal peptidase |
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| TIGRFAM ID | [TIGR00077] lipoprotein signal peptidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCATTAA CTTGGAAAGA CAGTGGCTTA CGTTGGTATT GGGTAGCTGT ATTGGTGTTT
TTCGCCGATC AGCTATCTAA ACAATGGGTC TTAGCCAATT TTGATTTGCA TGAATCGCTG
AATTTATTGC CTTTCTTTAA TTTCACTTAT GTACGTAACT ACGGGGCCGC CTTTAGTTTT
TTAAGTGACG CCGGTGGTTG GCAGCGTTGG TTATTTACGA TTGTTGCGGT TGGATTCAGT
ACTCTACTCA CAGTGTGGTT GCGTAGGCAA TCCGCTTCGT TGTTGAAACT GAATCTGGCT
TACACCTTAG TGATTGGTGG TGCCCTAGGC AATTTGGTCG ACAGATTAAT GCACGGTTTT
GTGGTTGATT TTATCGATTT TTTTTGGGCT AAGAGCCACT ATCCAGCTTT CAATATCGCC
GATTCGGCGA TTTGTATTGG TGCTGTGTTG ATCATTTGGG ATGCATTTTT AAGCGGTAAA
TCTGAAACAG ATAGCGCCGA AGGGGTTAAG AAGTGA
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| Protein sequence | MPLTWKDSGL RWYWVAVLVF FADQLSKQWV LANFDLHESL NLLPFFNFTY VRNYGAAFSF
LSDAGGWQRW LFTIVAVGFS TLLTVWLRRQ SASLLKLNLA YTLVIGGALG NLVDRLMHGF
VVDFIDFFWA KSHYPAFNIA DSAICIGAVL IIWDAFLSGK SETDSAEGVK K
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