Gene Shew185_1118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1118 
SymbolrpsT 
ID5372359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1330607 
End bp1330873 
Gene Length267 bp 
Protein Length88 aa 
Translation table11 
GC content45% 
IMG OID640829317 
Product30S ribosomal protein S20 
Protein accessionYP_001365333 
Protein GI152999652 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0268] Ribosomal protein S20 
TIGRFAM ID[TIGR00029] ribosomal protein S20 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value4.08096e-10 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCTAATA GCAAGTCTGC AAAGAAGCGC GCGCTTCAAT CTGAAAAGCG TCGTCAGCAT 
AACGCCAGCC GTCGCTCAAT GTTACGTACA TACGTTAAAA AAGTAATCGC TGCAATTAAA
GCAGGCGATC ACAAAACAGC AGCAGAAGCT TTTGCTGTTG CACAACCAAT CGTTGACCGT
ATGGCGACTA AAGGTCTTAT TCACAAGAAT AAAGCCGCTC GTCAAAAGGC ACGTTTGAAC
GCTAAGATCA AAGCAATCGC TGCTTAA
 
Protein sequence
MANSKSAKKR ALQSEKRRQH NASRRSMLRT YVKKVIAAIK AGDHKTAAEA FAVAQPIVDR 
MATKGLIHKN KAARQKARLN AKIKAIAA