Gene Shew185_1111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1111 
Symbol 
ID5373105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1320923 
End bp1321879 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content45% 
IMG OID640829310 
Producttransaldolase B 
Protein accessionYP_001365326 
Protein GI152999645 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0176] Transaldolase 
TIGRFAM ID[TIGR00874] transaldolase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.40039e-06 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAATA CATTAGAGCA ACTCAAGTTA TATACCACTA TCGTCGCTGA CACAGGCGAC 
ATCGAAGCGA TTAAACGCTA CCAACCTGAA GATGCGACAA CCAATCCATC GCTCATCTTG
AAAGCGGCTC AAATTCCTGA ATACGAATCC CTCATTGATA ACGCTATCGA CTGGGCAAAA
TCACAAAGTG ACGATCTCGC GCAGCAACTT GATGATGCCA GCGACAAGCT CGCCGTTAAT
ATCGGTGTAG AAATACTGAA ACTCGTTCCT GGTCGTATCT CTACTGAAGT CGATGCCCGT
TTATCATTCG ATAAAGAACA ATCCATCGCT AAGGCCCATA AGCTGGTTCG CCTCTACAAA
GAAGCGGGCG TTGATAAATC ACGCATTCTG ATCAAACTCG CTTCAACTTG GGAAGGCATT
TGTGCCGCTA AAGAGCTGGA GAAAGAAGGC ATCAACTGTA ACTTAACCCT ACTATTTAGC
TTTGCCCAAG CACGTGCTTG TGCCGAAGCG GGTGCTTATC TGATTTCGCC TTTTGTTGGC
CGCATTCTTG ATTGGTACAA AAAAGATACG GGTAAAGACT ACGACGCAGT AAATGATCCA
GGTGTCGTTT CTGTTACCGA AATCTATAAT TATTACAAAC AGCATGGTTT CAATACTGTC
GTTATGGGTG CAAGTTTCCG TAATATCGGT GAAATCATCG AGCTAGCAGG TTGTGATCGT
CTCACGATTG GCCCTTCTCT ATTAGAAGAA CTGGCTAATT CGCAAGTAGA CATTACTCCT
AAACTGGTTG CAGCAACCAG CACTGTCGCA GCTGAAGCCC CATTGACAGA AGCGCAATTC
CGTTGGGACT TTAACCAAGA TCCAATGGCA GTAGATAAGC TTGCGGAAGG TATTCGAAAC
TTTGCCATAG ACCAAGGCAA ACTCGAAGTG ATGCTCACGG CTAAGCTCGC AAACTAA
 
Protein sequence
MANTLEQLKL YTTIVADTGD IEAIKRYQPE DATTNPSLIL KAAQIPEYES LIDNAIDWAK 
SQSDDLAQQL DDASDKLAVN IGVEILKLVP GRISTEVDAR LSFDKEQSIA KAHKLVRLYK
EAGVDKSRIL IKLASTWEGI CAAKELEKEG INCNLTLLFS FAQARACAEA GAYLISPFVG
RILDWYKKDT GKDYDAVNDP GVVSVTEIYN YYKQHGFNTV VMGASFRNIG EIIELAGCDR
LTIGPSLLEE LANSQVDITP KLVAATSTVA AEAPLTEAQF RWDFNQDPMA VDKLAEGIRN
FAIDQGKLEV MLTAKLAN