Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_1104 |
Symbol | |
ID | 5370060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 1312479 |
End bp | 1314242 |
Gene Length | 1764 bp |
Protein Length | 587 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640829303 |
Product | putative sulfate transporter YchM |
Protein accession | YP_001365319 |
Protein GI | 152999638 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0659] Sulfate permease and related transporters (MFS superfamily) |
TIGRFAM ID | [TIGR00815] high affinity sulphate transporter 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCACACT CAGCTCATTT ATTTTCCCTA AGGATCGCCC ACGCACTCAC AGAAGCTTGC GTGAAGGATA AGTATTCGTT TAAACGTTTT GGGCAAGATC TTCTTGCCGG TCTCACAGTG GGTATTATTG CAATTCCATT AGCGATGGCA TTAGCCATTG CCAGTGGTGT TGCGCCTCAA TACGGCTTGT ATACCGCCAT TGTCGGTGGC TTTATTATCG CCATGTCTGG CGGCTCACGT TACAGCGTGT CCGGCCCGAC AGCGGCATTC GTGGTATTGC TCTACCCCAT AGCCCAACAG TTTGGTTTAG CAGGATTATT AATCGCAACT GTGATGTCGG GAATGATACT CGTCGGCATG GCGACGCTGC GCCTTGGCCG GTTGATTCTG TATATTCCCG AATCCGTCAC CTTAGGTTTT ACCGCAGGGA TCGGCGTAGT GATTGCCACC TTGCAGCTAA AAGACTTTTT CGGGCTCGAA ATTGCCCATA TGCCGGAGCA ATATCTGGCC AAGCTAATGG CATTAGCCCA AGCGCTTCCT TCGGTCCATT TGCCTAGCTT ACTGGTTGCA AGCGCCACCC TAGCGACTAT GCTACTTTGG CCTAAACTCA AAACACCTGT GCCAGCGCAC CTTCCGGCAA TCATACTCGG CACTATCCTC GCCTTGGTGC TCAATGCCAT GGGCGCTGAT ATAGAAACCA TAGGAACCCG TTTTCACTAT CAACTGAGTG ATGGCACCAC AGGCATGGGG ATCCCAGCGG TATTGCCAAG TTTCGAGTGG CCATGGCTGC AAGCTGGCGC CAATGGTCAA GCTTTTCAAT TTAATCTCGC GACCTTTCAA GCCTTGTTAC CCGCCGCCTT TGCCATTGCC ATGTTAGGGG CGATTGAATC GCTACTGTGT GCTGTGGTGC TCGATGGCAT GACAGGTAAA CGCCACAGTG CCAACAGTGA GTTACTCGGC CAAGGCATAG GTAATATCAT CACGCCGTTT TTTGGTGGGA TTCCAGCGAC AGCGGCAATC GCCCGTAGCG CGGCGAACGT CAAAGCGGGC GCTCAGAGTC CGATTGCGGC CATGATCCAC GCCATAGTGG TATTGTTTGG TTTAGTCGCC TTAGCGGGCG TACTCGCCTA CTTGCCGATG TCGGCCATGG CTGCCCTGCT ACTCGTCGTA GCTTGGAACA TGAGTGAGGC CCACAAAGCG CTGCATTTAG TTAAAACCGC GCCCACCAGC GATATCATGG TCTTTGTTAG CTGTTTTTCA TTAACGGTTA TTTTCGACAT GGTCATTGCC ATCAGTGTGG GGATTATTCT CGCCGCCTTG CTGTTTATGA AGGAAATTGC CGAGATGACA AGGCTTTACG ATATCAGCAC CAACAAGCGT TATGTCGATC AAGAGTTACC CGCCGATTGG GCCGTTCTCA AAATTAACGG GCCACTCTTC TTCGCCGCTG CCGATCGGAT TTTCTCCGAA ATCGCCAGTC TCACCGAAGA TAAACAAGTG ATAGTGCTGT ATCTCGATGG AGTCTCGATT TTGGATGCTG GAGGCTTAGC CGCGCTGACA AAACTGATTG AAAAATGTAA AGCAAATAAG ACTAAGCTGA TTATTGCCGA TCTACAGTTC CAGCCCATTC GAACGCTAGC AAGAGCCAAG ATCCAGCCGA TTGAGGGCGT GTTGAAGTTT TACTCGACCC TACGAGAAGC CATGGCCGAA GCGCCAGTCA TCACTCAGCA AACAGAAATC ACTGCGGATA AGCAGACGCA GTAA
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Protein sequence | MSHSAHLFSL RIAHALTEAC VKDKYSFKRF GQDLLAGLTV GIIAIPLAMA LAIASGVAPQ YGLYTAIVGG FIIAMSGGSR YSVSGPTAAF VVLLYPIAQQ FGLAGLLIAT VMSGMILVGM ATLRLGRLIL YIPESVTLGF TAGIGVVIAT LQLKDFFGLE IAHMPEQYLA KLMALAQALP SVHLPSLLVA SATLATMLLW PKLKTPVPAH LPAIILGTIL ALVLNAMGAD IETIGTRFHY QLSDGTTGMG IPAVLPSFEW PWLQAGANGQ AFQFNLATFQ ALLPAAFAIA MLGAIESLLC AVVLDGMTGK RHSANSELLG QGIGNIITPF FGGIPATAAI ARSAANVKAG AQSPIAAMIH AIVVLFGLVA LAGVLAYLPM SAMAALLLVV AWNMSEAHKA LHLVKTAPTS DIMVFVSCFS LTVIFDMVIA ISVGIILAAL LFMKEIAEMT RLYDISTNKR YVDQELPADW AVLKINGPLF FAAADRIFSE IASLTEDKQV IVLYLDGVSI LDAGGLAALT KLIEKCKANK TKLIIADLQF QPIRTLARAK IQPIEGVLKF YSTLREAMAE APVITQQTEI TADKQTQ
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