Gene Shew185_1080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1080 
Symbol 
ID5372236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand+ 
Start bp1276668 
End bp1277291 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content46% 
IMG OID640829273 
Productputative transcriptional regulator 
Protein accessionYP_001365295 
Protein GI152999614 
COG category[K] Transcription 
COG ID[COG2345] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACCA CTAATAAGAT TATTCAATTG CTCAAGTTAC ATGGCCCGCT TACTGCTAAA 
ACCTTAGCGG AGGAATTGGC GTTAACGACG ATGGGCGTGC GTCAACATCT TCAAGCTTTA 
GAAGACGCAG GCGATGTGGA CATCGAAGAT AGAGTTGAAG GTCGTGGTCG CCCAACGCGT 
TACTGGAGAT TAACTGAACA AAGCCGCAGT CATTTTGCCG ATCGTCATGA GGAATTGACG 
GTACAGCTAA TTGATTCGGT GAAAATGATC TTTGGTGACC AAGGCTTAGA TAAGCTTATC 
GACCACAGGG AGCAAAGTGC GTTAGTTCAG TATCGTGCCG CTATGGAAGG GGCGACAGAT 
ATTCCGACAC GTTTGGCCAT CCTTGCGAAA TTACGCTCGA ACGAAGGTTA TATGGCGACG 
ATGGAACAGG TAGATGGCGT GTATTTTTTA CTAGAAAATC ATTGTCCTAT CTGCGCCGCC 
GCTACTAAGT GTTTAAACTT TTGCCGCTCA GAGTTACAAC TTTTCCAGCA GTTATTCGCT 
GATATCGCGG TGGTGAGTCG CGAAGAACAT ATCATCGAAG GTGCACGCCG CTGTGCATAT 
AAGATTGAGG CTATTCCTCA CTAG
 
Protein sequence
MKTTNKIIQL LKLHGPLTAK TLAEELALTT MGVRQHLQAL EDAGDVDIED RVEGRGRPTR 
YWRLTEQSRS HFADRHEELT VQLIDSVKMI FGDQGLDKLI DHREQSALVQ YRAAMEGATD 
IPTRLAILAK LRSNEGYMAT MEQVDGVYFL LENHCPICAA ATKCLNFCRS ELQLFQQLFA 
DIAVVSREEH IIEGARRCAY KIEAIPH