Gene Shew185_1040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1040 
Symbol 
ID5370680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1235919 
End bp1236392 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content48% 
IMG OID640829233 
Producthypothetical protein 
Protein accessionYP_001365255 
Protein GI152999574 
COG category[S] Function unknown 
COG ID[COG3610] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0218174 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGGAAC TACTGATAAC GCTGCTGCAC GATGCTTTTT TCTCAGCAAT TCCCGCCGTG 
GGATTTGCTA TGGTGTTTAA TGTTCCTAAA CGATTTCTCC CCTATTGCGC CTTAGCGGGA
GCCATTGGTC ATAGCTCGCG TACCTTAATG CTACAGTTTG GTTTACCGAT TGAGTGGGCC
ACATTTGCCG CTGCTGCAAT CGTCGGGATT ATTACGATAG GGTTTGGAAA ACGCCATTTA
GCGCCACCTT TAATGTATGC TGTCGCTGCT ATTATACCTA TGATCCCTGG CACTTATGCC
TTTAATACCG TCATTGCCTT AGTGCAACTG ACTGCTCAGT CTCAGGTGAG TCCTGAACTG
ACGGCACAAG TGATTAGTAA TGGCCTCAAA ACCGTCTTTA TTCTCGGGGC GTTAGCTGTG
GGGTTGGCCA TGCCGAGCTT GCTGTATTTC AGAACCCGCC CCGTCATTCA ATAA
 
Protein sequence
MMELLITLLH DAFFSAIPAV GFAMVFNVPK RFLPYCALAG AIGHSSRTLM LQFGLPIEWA 
TFAAAAIVGI ITIGFGKRHL APPLMYAVAA IIPMIPGTYA FNTVIALVQL TAQSQVSPEL
TAQVISNGLK TVFILGALAV GLAMPSLLYF RTRPVIQ