Gene Shew185_1039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1039 
Symbol 
ID5370679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1235161 
End bp1235922 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content47% 
IMG OID640829232 
Producthypothetical protein 
Protein accessionYP_001365254 
Protein GI152999573 
COG category[S] Function unknown 
COG ID[COG2966] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.000460827 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTACGCAG ATACTCAAAA TGATATTACT CGGCAAGTTG TGCGTGCTGC ACAACTGCTA 
CTGGCCTACG GCGCAGAATC TGATTTAGTT GAAGAAATCA GCCAGCGTCT AGGTCAGGCT
TTAGGCCTTG CCAGCGTAGA ACTCTCTATT TCCTCCAATT CCCTCGTGTT AACCAGTTTA
GTTCATGGTC GCTGTATCAC TACGACTCGT CGTATTCGTG AGCATGGCAT TAATATGACC
ATAGTTTGTG AATTACAACG CATCTGTTTA TTAGCTGAAA AAGGTCTGTA TGGCCCCAAC
GAAGTCCGTA AACGTTTGGC GCGGATTGAG CCTAAAACCT ATCCTCCTAG TTTAGTTGTC
TTCATGATTG GCCTGTCTTG TGCCAGTTTT TGTCACCTGT TTAATGGTGA TCTTATCTCG
TGTGTGATTA CCTTTTTTGC CGCAGCTGTG GGCATGTCGG TACGTTTAGC GATTGCTAAG
CAGCATTTTA ATTTATTGGT TAACTTTGCC GTCACGGCTT TCGTCACCAG TATGTTGGCT
CAAACTGGCT ATGTGTTTGC ATTGAGTGAA ACGCCTAAAG CAGCTATGGC CGCGAGTGTG
CTAATGCTGG TGCCGGGTTT TCCGATGATC AATGCGATTT CTGACATGGT GAAAGGGCAT
ATGAATGTCG GCATCTCCCG TTGGGGCCAT GCGACCTTGC TGACCGTTTC TTCTGTGATA
GGCATTACGA TTGCGATGCA GATCGGCGGG ATTTTCCTAT GA
 
Protein sequence
MYADTQNDIT RQVVRAAQLL LAYGAESDLV EEISQRLGQA LGLASVELSI SSNSLVLTSL 
VHGRCITTTR RIREHGINMT IVCELQRICL LAEKGLYGPN EVRKRLARIE PKTYPPSLVV
FMIGLSCASF CHLFNGDLIS CVITFFAAAV GMSVRLAIAK QHFNLLVNFA VTAFVTSMLA
QTGYVFALSE TPKAAMAASV LMLVPGFPMI NAISDMVKGH MNVGISRWGH ATLLTVSSVI
GITIAMQIGG IFL