| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1037 |
|---|
| Symbol | rpmA |
|---|
| ID | 5371981 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 1233495 |
|---|
| End bp | 1233749 |
|---|
| Gene Length | 255 bp |
|---|
| Protein Length | 84 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640829230 |
|---|
| Product | 50S ribosomal protein L27 |
|---|
| Protein accession | YP_001365252 |
|---|
| Protein GI | 152999571 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0211] Ribosomal protein L27 |
|---|
| TIGRFAM ID | [TIGR00062] ribosomal protein L27 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0000000911721 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCACATA AAAAAGCTGG CGGTTCTACT CGTAACGGCC GCGATTCAGA AAGTAAACGT
CTAGGTGTTA AGCGCTTTGG CGGTGAATCA GTTCTAGCTG GTAACATTAT CGTTCGTCAA
CGTGGTACTA AATTCCACGC TGGTGTAAAC GTAGGTATTG GTCGTGACCA TACTCTGTTT
GCTCTGACTG ACGGTAAAGT GAAATTCGAA GTTAAAGGCG CTAATAACCG TAAGTTTATT
AGCATCGAAG CTTAA
|
|---|
| Protein sequence | MAHKKAGGST RNGRDSESKR LGVKRFGGES VLAGNIIVRQ RGTKFHAGVN VGIGRDHTLF
ALTDGKVKFE VKGANNRKFI SIEA
|
|---|
| |