Gene Shew185_1034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1034 
Symbol 
ID5372449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand+ 
Start bp1231176 
End bp1231841 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content48% 
IMG OID640829227 
Producturacil-DNA glycosylase 
Protein accessionYP_001365249 
Protein GI152999568 
COG category[L] Replication, recombination and repair 
COG ID[COG0692] Uracil DNA glycosylase 
TIGRFAM ID[TIGR00628] uracil-DNA glycosylase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.000379797 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACTCAGG CAACATGGCA AACATTTATC GATGAGCAAA AAGCATTGCC TTATTTTCAG 
CAACTAAGTG CGTTTGTAGA CAATGAACGT AGGGCTGGGA AAGTGGTTTA TCCACCCGAA 
GCCGATGTTT TTAATGCCTT TACTATGACT CCGCTTGAAA AGGTCAAAGT GGTATTGATT 
GGCCAAGATC CCTATCACGG CCCAGATCAA GCCCATGGTT TATGCTTTTC GGTCAAACGC 
GGTATTAAAC CGCCGCCTTC CTTAGCCAAT ATGTACAAGG AATTAGCGAC GGATATTGAT 
GGCTTTACCA TTCCATCCCA CGGGGATTTA TCCGCATGGG CGGAGCAGGG GATATTAATG 
CTCAATACGG TATTAACCGT TGAGCAAGGT AAGGCGCACT CCCATGCCAA AGCAGGCTGG 
GAAGTGTTTA CTGCTGCCGC GCTGGAATTA TTAAATCGCC AGACACAGCC GATTATCTTC 
GTGCTTTGGG GCAGTCATGC CATCAAAAAA GGTCAAGTGA TTAACGCACC GCAACATCAA 
GTGCTCACTG GGCCGCATCC TTCACCTTTA TCGGCCTATC GGGGTTTCTT TGGCTGTGGG 
CATTTTTCTC AAGTGAATCA ATTATTACTT GAGCGGGGCG AAGCGCCGAT CCGCTGGCAG 
GTTTAA
 
Protein sequence
MTQATWQTFI DEQKALPYFQ QLSAFVDNER RAGKVVYPPE ADVFNAFTMT PLEKVKVVLI 
GQDPYHGPDQ AHGLCFSVKR GIKPPPSLAN MYKELATDID GFTIPSHGDL SAWAEQGILM 
LNTVLTVEQG KAHSHAKAGW EVFTAAALEL LNRQTQPIIF VLWGSHAIKK GQVINAPQHQ 
VLTGPHPSPL SAYRGFFGCG HFSQVNQLLL ERGEAPIRWQ V