| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1024 |
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| Symbol | |
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| ID | 5372431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 1216546 |
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| End bp | 1218450 |
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| Gene Length | 1905 bp |
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| Protein Length | 634 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640829217 |
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| Product | lipid ABC transporter ATPase/inner membrane protein |
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| Protein accession | YP_001365239 |
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| Protein GI | 152999558 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR02204] ABC transporter, permease/ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACAGAGC CGACCGTCGA ATTAGCCAAA TCACCAAACC CCATTAAAGC GGGCGCAGAG
CCATTGCCTG AAAAGTTAAT TCCAGTCACG CCTACAATAA GCGCTGATGC ATCGAAGGTT
AAACCAACCT CGGCGCAGCA AAGATCGGTA TTGCCTTGGA TTATGGGGTT TCTTAAACCC
TACAAACTGA AAGTCGTCGC GGCGATTATT TGCTTGATGA TAGGCTCGCT CGCTTGGCTA
TCATTGGGCC AAGGTGTGCG CTTAATGGTC GATGAAGGCT TTGTGCGCGA CAATGCGCAG
CGGCTGAATG AAATCATACT GTTAGTGCTT GGGATTACCG CCGTCAGTGG CACAGCGGTG
TTTTGCCGCT TCTATTTAAT GACTTGGCTC GGCGAGCGGG TCAGTGCCGA TATTCGTCTA
ACTGTTTACA ATCAACTGCT TAAACTCTCG CCCGCCTTTT ACGCTAAGGT GCGTACTGGC
GAAGTGATCT CCCGTTTTAC CGCCGACTCT ACTTTGCTGC AAACCGTGGT GGGCTCGAGT
TTATCTATGG CACTGCGCTC TAGTGTGACG GTACTTGGTG GTTTAGTCAT GATGGGGATC
ACCAGCGTTA AGATGACCTT ATTAGTGTTA TTGGCTGTAC CTTTAGTGTT GGGACCTGTG
ATCTTTTTCG GCCGTAAAGT GCGTACGCTG GCGCGAGAAA GCCAAGACAG GGTTGCCGAT
CTCGGCGCTT ATGTTGATGA AACACTTCAT GAAATTCATA CGGTACAAGC CTATGGTCAT
GAAGATAAAG ACCGTAGCTT ATTCAATACC CGCGTCGAAG ATGTGATGTC TGCGGCAAGC
GGGCGGATCC GTTACCGTGC CTTGCTGATC TCAACCGTGA TGTTTTTAAG TATCGCGGCG
ATTGCTATGG TGACTTGGGT CGGTGCCCAC GATGTGATGG CGGGTAAGAT GACGGGCGGC
GAGTTATCCG CCTTTATGTT TTACGCTGTG ATGGTTGCAG GCGCTGTGGC GACCATTAGC
GAAGTAATCG GCGAAATTCA GCGGGCTTCT GGCGCCGCCG AGCGTTTAAT TGAACTGGCT
GAAACGCCAG TGGATATTCC CGTTGCAACT CATCCTATTG TTTTACCCGC CAAGGTCAGT
GGCGAGTTAA TGATTGAAGG ACTCAACTTT GCCTATCCAG AGCATGATGC CTTAGTGCTA
AAACAGCTCA ATATGGCTAT TGCCGCGGGT GAGCGGGTCG CCTTAGTCGG CCCAAGTGGC
GCGGGTAAGA GTACCTTGTT CCAGTTATTG CAGCGCTTTT ATGTGCCTAG CGCTGGCAGT
ATTCGACTGG AAGGAATTGA TATTGCTAAG CTTCTGCCAC ATGACCTTCG GGCGCAGTTT
GCTCTGGTGC CGCAGGACTC AGTGATTTTT GCGACCAGCG TACTTGAAAA CGTGCGTTAT
GGCCGAGTCG ATGCGACTGA GCAAGAAGTG ATTGATGCTT GTATTGCAGC CCGTGCCCAC
GAGTTTATTA GCGAGTTTAC TGACGGTTAT CAAACCTATT TAGGTGAGCG TGGCGTGCGG
CTTTCTGGTG GGCAAAAACA GCGGATCGCC ATTGCACGGG CGATTTTAGC CGACAGACCC
ATATTGTTAC TCGATGAAGC GACCAGCGCT TTAGATGCGG TAAGCGAGCA GAAAGTGAAG
CAAGCGCTGG ACGTATTGAT GGCGGGTAAA ACCACCTTGA TTATTGCCCA CCGCTTATCG
ACGGTAATCA ATGCCGATAG GATTTTTGTG TTCGATAAGG GCGAGATTGT TGCCTGCGGA
CGCCACCAAG AGTTGATGCA ATCCAATGCG TTATATCGTG AATTTGCCAG TCTGCAATTG
TTAACCGAAG AGGCCAATGC CAGCGCCTTG AATGAGACCA TTTAA
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| Protein sequence | MTEPTVELAK SPNPIKAGAE PLPEKLIPVT PTISADASKV KPTSAQQRSV LPWIMGFLKP
YKLKVVAAII CLMIGSLAWL SLGQGVRLMV DEGFVRDNAQ RLNEIILLVL GITAVSGTAV
FCRFYLMTWL GERVSADIRL TVYNQLLKLS PAFYAKVRTG EVISRFTADS TLLQTVVGSS
LSMALRSSVT VLGGLVMMGI TSVKMTLLVL LAVPLVLGPV IFFGRKVRTL ARESQDRVAD
LGAYVDETLH EIHTVQAYGH EDKDRSLFNT RVEDVMSAAS GRIRYRALLI STVMFLSIAA
IAMVTWVGAH DVMAGKMTGG ELSAFMFYAV MVAGAVATIS EVIGEIQRAS GAAERLIELA
ETPVDIPVAT HPIVLPAKVS GELMIEGLNF AYPEHDALVL KQLNMAIAAG ERVALVGPSG
AGKSTLFQLL QRFYVPSAGS IRLEGIDIAK LLPHDLRAQF ALVPQDSVIF ATSVLENVRY
GRVDATEQEV IDACIAARAH EFISEFTDGY QTYLGERGVR LSGGQKQRIA IARAILADRP
ILLLDEATSA LDAVSEQKVK QALDVLMAGK TTLIIAHRLS TVINADRIFV FDKGEIVACG
RHQELMQSNA LYREFASLQL LTEEANASAL NETI
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