Gene Shew185_1021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1021 
Symbol 
ID5369383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1212932 
End bp1215022 
Gene Length2091 bp 
Protein Length696 aa 
Translation table11 
GC content47% 
IMG OID640829214 
ProductTonB-dependent heme/hemoglobin receptor family protein 
Protein accessionYP_001365236 
Protein GI152999555 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4771] Outer membrane receptor for ferrienterochelin and colicins 
TIGRFAM ID[TIGR01786] TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein
[TIGR01785] TonB-dependent heme/hemoglobin receptor family protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value3.7848e-08 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAA AGCCGTTAGT GATCGCCATG GCGATAGCAC TGAGTAGTAC GGCCCTAAGT 
TTTACGTTAG CGGCAGAAGA AAATGTTAAG CCTGTTGTGC AAGGTGATGC GGATAAAAAA
CTCGTCACGA CAGAGTTTGA TGAAGTGTTA GTGAGCGCAA CCCGCATCAG CGAAAAAGCC
TCCGAAACCA GCCGCAGCGT AGCCGTGGTG GGTGAAGAGC AACTTGCGGT TGCTCAAGCA
TCATCTGTGG CTAATGCACT TAAAAACGAG GCGAATATTA CGCTGACGAA TGGCCCAAGA
GCTTCATCCC AAGGGGTTGA AATCCGTGGT TTAAGTGGCA GTCGAGTACT GCAGACGATT
GACGGAGCGA GACAAAATAC CGGCTCTGGC CACAGAGCAA CCTACTTTAT GGACCCTGAG
TTACTGAAAT CCATAGAAGT GCTGCGCGGT CCAGCCAGTA GTTTGTGGGG CAGTGGCGCA
CTGGGTGGCG TCGTCGCGCA AAATACTAAG TCAGCGCAGG ATTTCTTAGC GCCCAATGAA
ACCTTTGGTG GCTTCCTAAA ACAAGGTTAT GAGACCAATG GCTCGCGCAC TAAAACCAGT
GGCGCTATTT ATGGTCAACA AGACAGTATC GATTGGTTAC TAAACGGCTC TTACACCGAC
TCAAACAATA TCAAAACCGG TAATGACGAA ACCCTAAGCA ACAGTTCATC CCATGGCAGC
AGTGGTTTAG TCAAATTCGG TTGGCAAGCC GATGAGGCGT CACGCTTAGA GTTATCTGCG
AGAGTCAATA AGATCAATGA ATTAGTGCCA AGTAATCCTT CTGCGGCAGC CAGTAATTCA
ATACCTTTAG TGCGTCGCAA GACAGACGAT CAAAATATCA CCTTAGATTA CAGTTTCAAT
CCAGCCAATA ACCCGTATCT GGATACTAAG ATGCAAGTGT ATTGGAACAG TACCGACTAC
GATGAAGACC GCATCACTAA AGGTCAGCTA GACAGCACTG AGTATCGTAC AGTGGGCATT
AACCTCAATA ACAGTTCGCG CTTGGGCAAT ACTTTGTTGA CCTACGGCGT TGATGGCTTT
CGCGATACCA TAGAAACGAC GCGTGATGAT TCGGGTCAAG TGGGCCAGCG TCCGGGAAAT
ATTGATGGTG AAACCACAGT ATGGGGCGCT TTTACGCGGG CAGATATTGA GCTGACTCAG
ACGTTAAATC TGGATGCGGG TCTGCGTTAT GATAGCTTTA AAAATGACAG TAATAACCTC
AATTTATCCT CCGATGATAA TGAGTTATCG CCATCACTAG GGCTAGTTTG GCAGACTCAA
TCTTGGTTGA CCTTAAGTGC CCGTTACGAT CAAGCCTTCC GCGCACCTTC GGTAGAGGAA
ATGTATTCTA GCGGCACCCA TTACTGCATT CCACCTATTC CGGGATTTTT GCCCCAAGGT
CTATGCAACA CCTTTGCGAC CAATCCGGAT CTAAAGTCTG AAAAAGCCCG CAACAAAGAA
ATCAAAGCAG ACTTACGTTT CAGTGAGTTA GCCGGTGATG ATGAATTAGC GTTGACGTTC
AACATCTTCC GTAACGATGT GGACGATTTC ATCGTGCAGC AAGTGTCTAA TCCTTGGCAT
GGTATTCCTG GATTCGAGCA AACGACCTCA TGGAATAACG TCGAAGATGC GCGTTTAACT
GGCTTTGAAA TTAGCGGTCG TTACCGAATT GGCCAAACTC GCTTAGCGAT TAATTATGGC
CAAACCCATG GTGAAGATCG TAAAAATGGC GGCGATATTG AAGGTATACC CGCCAATAAA
TTTAACGTTG ATTTATCCCA AGGCATTATG GAAGGCGACA TGAAACTCGG CACTCGCGTT
ACTTATGTGG CGACGCAGTC GAATACGCCT GATGGCTTCA AAGTGGCGAA ATACGACGAT
TACACCCTAT GGGATGTGTA TGTTGCGTGG GAGCCGACTA TGGGCGCGAT GGCGGGTGTG
AGAGTGGATT TCGCCATCGA AAACATCGGC GATGAAAAGT ACCAACAAGC GTGGCAAACC
TTGTATCAAC CTGGCCGTAA TATGAAGTTA TCGGCGCGCT ATATGTTCTA A
 
Protein sequence
MKKKPLVIAM AIALSSTALS FTLAAEENVK PVVQGDADKK LVTTEFDEVL VSATRISEKA 
SETSRSVAVV GEEQLAVAQA SSVANALKNE ANITLTNGPR ASSQGVEIRG LSGSRVLQTI
DGARQNTGSG HRATYFMDPE LLKSIEVLRG PASSLWGSGA LGGVVAQNTK SAQDFLAPNE
TFGGFLKQGY ETNGSRTKTS GAIYGQQDSI DWLLNGSYTD SNNIKTGNDE TLSNSSSHGS
SGLVKFGWQA DEASRLELSA RVNKINELVP SNPSAAASNS IPLVRRKTDD QNITLDYSFN
PANNPYLDTK MQVYWNSTDY DEDRITKGQL DSTEYRTVGI NLNNSSRLGN TLLTYGVDGF
RDTIETTRDD SGQVGQRPGN IDGETTVWGA FTRADIELTQ TLNLDAGLRY DSFKNDSNNL
NLSSDDNELS PSLGLVWQTQ SWLTLSARYD QAFRAPSVEE MYSSGTHYCI PPIPGFLPQG
LCNTFATNPD LKSEKARNKE IKADLRFSEL AGDDELALTF NIFRNDVDDF IVQQVSNPWH
GIPGFEQTTS WNNVEDARLT GFEISGRYRI GQTRLAINYG QTHGEDRKNG GDIEGIPANK
FNVDLSQGIM EGDMKLGTRV TYVATQSNTP DGFKVAKYDD YTLWDVYVAW EPTMGAMAGV
RVDFAIENIG DEKYQQAWQT LYQPGRNMKL SARYMF