Gene Shew185_0989 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_0989 
Symbol 
ID5373508 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1182177 
End bp1183634 
Gene Length1458 bp 
Protein Length485 aa 
Translation table11 
GC content50% 
IMG OID640829183 
ProductGntR family transcriptional regulator 
Protein accessionYP_001365205 
Protein GI152999524 
COG category[E] Amino acid transport and metabolism
[K] Transcription 
COG ID[COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAT CACAATCCAA CTTCCCTCAT TTGCAACTCA AGGATGGCAT CCTCAAAGAC 
CAGCTTTACC ATGCCTTTAG AGAGGCGATT CTCGATGGAC GCTTGCATCC TAGAATGAAG
CTGCCCTCCA GCAGAGCCTT ATCGGAAACC ATGCAGATTT CGCGAAACTC AGTACTGCAA
GGGTTTGATC GCCTAATTGA TGAAGGCTAC CTGCTGACTA AGCCAGGTTC GGGCACCTAT
GTGTCTGATA CGATTCCCGA CGAACTGATC GACATCCCAA ACCGCAGTGA TGTAAGCGTT
CAACCCTTTG ATTCTGAATT GAAAATCAAT CCACAGTTAC TGGAGATTGC GCGACTTAGG
GACAAAGGAA ATACCCGTCA CAGCATGTTC AACATTGGCG TGGGATGTGT TGATCTTTTC
CCGCACCAAC TTTGGGGCCG CCTGTTAGGT AGAGTCTGGC GACAATCGCG CAAAACGCAG
GGGAAACATA GCCATAGCGC TGGGCATTTA CCATTGCGCG AAGCGATCAG CGACTATGCC
CGTTCAACCC GAGGGCTAAA TTGCACGCCC GAGCAAATCA TCATAGTCAA TGGCACTCAG
CAAGCCATTA ATCTCACGGC ACAGGTACTG CTACAACAGC GAGATGAAGT CTGGCTCGAT
GAACCCGGAT ACGACGGCGC CTTAGGCGCT TTTCTCTCGC AAAATCTGCA AGTCCGCCCA
GTTAGCCTTG ATGATGAAGG TACAAAGATA GCCGAGGCGA TACAGCAATG GCCCTCGGTG
AAACTGGCTT TTACCGCACC TTCACATCAG TTCCCCCTCG GCGGAACGCT TAGTCTGCCA
CGGCGATTAG CCTTACTCGA TTGGGCCGCT GAGCAGAATA AGTGGATTTT AGAAGATGAC
TATAATAGCG AGTTTCGTTA TAGCGCCCGC CCGATACAGG CATTGCAGGG ACTCGATAAA
CAACAGCGGG TGATCTACGC AGGCACCTTT TCCAAGATGT TATTACCAGA GCTACGACTC
GGCTTTCTCG TCGTTCCGCC TAAACTGGTG GACGCCTTTA ACCTTGCCAA ACATTACGCC
GACTCGCATA CGGCTTACCT AGAACAAGCC ACATTGGCGC TGTTTATCGC AGAGGGACAT
TACGCCCGGC ATGTACGGCG AGTTCGAAAA GCTTGTTTAG CGCGCCAAAC GGCGTTAATC
ACTGCAATTG AGCAGTATCT GTCAAACAAA TTGTCAGTTC AGACCTCAGA TTCAGGGATT
CACCTCGTGT GTTGGCTAAA AGGCGACTTG ACCGAAGACG AAGTGATCAA CAAATGCCGC
CAACTCAGTT TAGGGGCGCA GCCTTTGTCT CGGTATTGCC AAGCGCCCTA TCCAAGGCAA
GCTATTTTAC TGGGTTACGC AGCCCATACG CCCGATGAGC TGCGGGAAAA TATTAAAAAA
CTCGCCCAAG TCCTTTAA
 
Protein sequence
MKKSQSNFPH LQLKDGILKD QLYHAFREAI LDGRLHPRMK LPSSRALSET MQISRNSVLQ 
GFDRLIDEGY LLTKPGSGTY VSDTIPDELI DIPNRSDVSV QPFDSELKIN PQLLEIARLR
DKGNTRHSMF NIGVGCVDLF PHQLWGRLLG RVWRQSRKTQ GKHSHSAGHL PLREAISDYA
RSTRGLNCTP EQIIIVNGTQ QAINLTAQVL LQQRDEVWLD EPGYDGALGA FLSQNLQVRP
VSLDDEGTKI AEAIQQWPSV KLAFTAPSHQ FPLGGTLSLP RRLALLDWAA EQNKWILEDD
YNSEFRYSAR PIQALQGLDK QQRVIYAGTF SKMLLPELRL GFLVVPPKLV DAFNLAKHYA
DSHTAYLEQA TLALFIAEGH YARHVRRVRK ACLARQTALI TAIEQYLSNK LSVQTSDSGI
HLVCWLKGDL TEDEVINKCR QLSLGAQPLS RYCQAPYPRQ AILLGYAAHT PDELRENIKK
LAQVL