Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_0957 |
Symbol | pbpG |
ID | 5370293 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 1136499 |
End bp | 1137464 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640829151 |
Product | D-alanyl-D-alanine endopeptidase |
Protein accession | YP_001365173 |
Protein GI | 152999492 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGATCC GTTTTCTGCT CAGTAGTTTT ATTCTTGTAT GCAGCAGTCT AACTGTTGCC GCGACAGCGC ATTCAGCCGA TTCGGCCTCT GTCACTACTA AACATGCCAG CAAAAATGCA CCCGCTAAAA AAGCACCTGC AAAACAGCAA GAAGTGGCAT CGAGTAGCGC TATGGTGGTC GACCTTAAAA CCAATGAAGT TTTATATTCG AGTAACCCTA ATGCAGTGGT GCCCATCGCC TCAGTGACTA AGCTGATGAC GGCCATGGTG ACCTTAGATG CAAAGCTGGC GATGGACGAA AAGTTAGCGG TTAATATTAA CGACACCAAA GAAATGCGCG GCGTGTATTC TAGAGTGCGT ATCGGCAGTG AAATTAGCCG TAAAGACATG TTATTGCTAA CTTTGATGTC ATCAGAAAAC CGCGCAGCAG CCAGCCTTGC CCACCATTAT CCCGGTGGTC ACAAAGCCTT TATTAAGGCA ATGAATGCCA AAGCTAAAGC ACTGGGCATG AAGAATACCC GTTATGTTGA ACCTACGGGT TTGTCGTACA AAAACGTCTC TAGTGCCAGC GACCTAATTG TGCTGCTTAA GGCCAGTGAA GGTTATCCTA TGCTAGGCCA GTTGAGTTCG ACCGAGAAAA AGACGGTCAC CTTTGCTAAA CCTAGATACA GTTTAGATTT CCGCAACACT AACCGTTTGG TTTATAAAGA TAACTGGAAT ATCCATCTCA CCAAAACCGG TTTTACTAAC GAAGCGGGGC ATTGCTTAGT GATGCGCACC GAAATGGCAA AACGCCAAGT GGCCTTTGTG GTACTCGATG CTTACGGCAA ATATACCCAT ATCGCCGATG CAAACCGTTT ACGTAACTGG TTAGAAACAG GCAAAGTCAC CCCGATCCCT GCCGAAGCTA AGCAATATAA GAAACAGCGT AGCCAGCAGC AATTAGCTAA GTTGAGTGAG ACCTAG
|
Protein sequence | MKIRFLLSSF ILVCSSLTVA ATAHSADSAS VTTKHASKNA PAKKAPAKQQ EVASSSAMVV DLKTNEVLYS SNPNAVVPIA SVTKLMTAMV TLDAKLAMDE KLAVNINDTK EMRGVYSRVR IGSEISRKDM LLLTLMSSEN RAAASLAHHY PGGHKAFIKA MNAKAKALGM KNTRYVEPTG LSYKNVSSAS DLIVLLKASE GYPMLGQLSS TEKKTVTFAK PRYSLDFRNT NRLVYKDNWN IHLTKTGFTN EAGHCLVMRT EMAKRQVAFV VLDAYGKYTH IADANRLRNW LETGKVTPIP AEAKQYKKQR SQQQLAKLSE T
|
| |