| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0953 |
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| Symbol | |
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| ID | 5370878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 1133264 |
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| End bp | 1134154 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640829147 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001365169 |
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| Protein GI | 152999488 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACCTCA AAGTTATTCG CTATTTTATC GAAATCGTCG ATGCCGGAGG CTTTGGTAAA
GCCAGCGAAA AAGTCCATCT CACCCAACCT GCGTTATCAA AAGCCGTGCG CCAGTTAGAA
CAAGAACTCG ATCTCACCCT GCTTGAGCGC GGTAAACGCG GCACCCAAGT CAAACTCACT
CCCGCAGGCG AAGTCGTTTA TCGACACGGT AAAGACCTGC TCGCAGGGCG ACAACGCATG
CTCGCCGAAC TCACGGCGCA GCGCAGCTTA ACTGCGGGCG AACTCAATCT GGGATTAGCG
CCGCTCGGCA GCGCCGAGAT TTTTGCTCCC ATTATTGCTA AGTATCGCCA GCAATATCCG
CAAATTGACA TGCACTTGCT CGTCCGTGGC GGTGTAGAAC AAACTTCGGC GATCCAAAAG
GGTGAGATTG AACTAGCCAC AGGGATTATC GATTTTGATG ATGGCTATGA TGGTATTCGG
GTGTTTAACG ATCCTATGGT AGTGGTGCTT CCCAAGGAAA ATCCGTTATC CACCCGACAG
ATATTGTCGT TTAGGGATCT CAGCGCCGAT CCTCAAGTGA TGTTCGAAAC CGAATACACC
CTCTATCAAT TAGTGCTCAA TGCCTGCCGA CACGCCGGAT TTGTCCCGAA AAACATTACC
CGCGTCAGCC AAGCCGATTT CGGGATTGCC TTAGTCGCGG CGGGCACTGG GGTGATGGTA
TTGCCGCGCT CCATCGCGCG GCGCTACAGT GTACCCGGCG TCGTGAATAT CCCGCTGGCG
AGTGACGAGC TGCGCTGGGA GTTATCGCTC TTTTGGCGCA AAGACCAAGT ATTGTCCTTT
GCAGCTCAAG CCATGATCGC TTTAGTCGAG AAGCACTTAA CTCATAAGTG A
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| Protein sequence | MDLKVIRYFI EIVDAGGFGK ASEKVHLTQP ALSKAVRQLE QELDLTLLER GKRGTQVKLT
PAGEVVYRHG KDLLAGRQRM LAELTAQRSL TAGELNLGLA PLGSAEIFAP IIAKYRQQYP
QIDMHLLVRG GVEQTSAIQK GEIELATGII DFDDGYDGIR VFNDPMVVVL PKENPLSTRQ
ILSFRDLSAD PQVMFETEYT LYQLVLNACR HAGFVPKNIT RVSQADFGIA LVAAGTGVMV
LPRSIARRYS VPGVVNIPLA SDELRWELSL FWRKDQVLSF AAQAMIALVE KHLTHK
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