| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0899 |
|---|
| Symbol | |
|---|
| ID | 5370994 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 1066496 |
|---|
| End bp | 1067308 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640829094 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001365116 |
|---|
| Protein GI | 152999435 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1664] Integral membrane protein CcmA involved in cell shape determination |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCCTA TGGCTAGCAA AGGCAATGGC ATTACTTTTA TCAGTGCACA AACCTCGATT
GAGGGTGACA TCCAGTTAGA GAGCACGGCA TTAATTGCGG GTAAATTGCA GGGCAAGATT
GGTTCAGCGG GACAAATTAA GATCGAACTC GGCGGCGAGA TCTCCGGTGA AGTCAGCTGT
GATGAGTTGC GGGTGTGCGG CGTATTTAGT GGTCGAGTCT GTTGTAATAA GTTGATTATT
ACCAGTTCTG GAGTGGTTGA CGGTGAAGTT GCTAGCCATC AGATGGAGAT TTACGAAGGC
GGCCAGTTTA TTGGTCAGCG GATTAAAGGC CCTGAGCTTG ATGCCTTGCC TGACATGCTA
AAAGCGATCG AGCCAGCGGC TCAACGCTCG GATGCGCACC TATATGCCAG TGAGAGCGGT
TCATTAAGAG GCGATAATCG GGCGATTCGT CCTTGGTTGT ATGTTGCTGC GGCAACTGTT
GTCATCGCCT TGGGCTTTAG TTTTGGACCC GAGCAATTGC GTGAGTGGTT ACCGAATGTG
AGTGATAGCC CGCTCAATAC TGAAGTGTCT CCCGTGACTC AGGAGCTGGA TGTTGAAAAG
GGTTTCAATC CATTACTGAC TGAGCAAACG ACTGCCCCAG ATACCGCGAA TGCCGACAAT
ACGGCGGCGG TATCCGCAGA TCCCGATCCG CTGGCTTTAT CGCAGGATTC GGCGATGGAA
GATTTACAGC AAATGGAACA AGGTCATGCA CAGATGGCGC AGGGTGATAA TGGCACCGCG
CCCGCCAGCG AGAATGCAGG CAATAAGCTC TGA
|
|---|
| Protein sequence | MNPMASKGNG ITFISAQTSI EGDIQLESTA LIAGKLQGKI GSAGQIKIEL GGEISGEVSC
DELRVCGVFS GRVCCNKLII TSSGVVDGEV ASHQMEIYEG GQFIGQRIKG PELDALPDML
KAIEPAAQRS DAHLYASESG SLRGDNRAIR PWLYVAAATV VIALGFSFGP EQLREWLPNV
SDSPLNTEVS PVTQELDVEK GFNPLLTEQT TAPDTANADN TAAVSADPDP LALSQDSAME
DLQQMEQGHA QMAQGDNGTA PASENAGNKL
|
|---|
| |