| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0894 |
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| Symbol | |
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| ID | 5370783 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 1059248 |
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| End bp | 1060219 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640829089 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001365111 |
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| Protein GI | 152999430 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG2203] FOG: GAF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.499341 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATTAC CTACTATCCC TGAAAACGAG CTGCAACGTT TGGCCACGTT ACGCGCACTC
AATGTGCTCG ACACCGATGC CGAGGAACGT TTCGATCGTA TCACTCGGCT CACGCGCAGA
ATTTTCTCTT TGCCGATTTG TGTTGTGACC TTAGTAGATG CCGAGCGGCA GTGGTTTAAA
TCTCGCCAAG GATTAGAGGT GACTGAAACA CCACGGGAAA TTTCATTTTG TGGCCATGCG
ATCAATCAAG ACGATATTTT TATCGTAAAC GACGCCCTTA AAGATCCGCG CTTTAGTGAC
AATCCTCTGG TGACTGAGCA GCCACATATT CGCTTTTACG CAGGCTATCC CTTAACCATT
CATAGGCAAT ATCGGGTAGG AACCTTGTGT TTAATCGGCA CTGAACCGCG GGATTTTACG
GCTGAAGATA TTGAAACCTT GACGGATTTA GGTGAAATGG TGGAGGCGGA ATTACTCTCT
ATCGCGCAAA ACACTTTAGA TCCTTTGACC ACGATTTCGA ATCGGCGTGG ATTTGAGTTA
CTGGCCCATC AGGCGCTGGC GAGTTGTCGA CGTACCGAAT CTGAGGCGGC CTTACTCTTC
TTTGATCTCG ATTTCTTTAA GGAAGTGAAT GACAACTTTG GTCACCTCAA GGGCGACCAA
GTGTTATACG ATTTTGCCCA TATCTTGATG ACCGCTTTTA GGGAGTCGGA TGTGATTGCA
AGGCTTGGCG GTGATGAGTT TGTGGTGCTA TTAAGTTTTG TGCATAGGGA TACAGTCGAT
CGCGTGATTG AGCGTTTTAA GCAATTACTT GAGCAATATA ATCAACAGCA TCCTAAGCAA
AATAGCTTAG CGACCAGTAT TGGTATCGCC CATTGGACGC CAGATTCTGA TGTGAGCTTA
GAGGATCTGT TAGATTCCGC CGATAAAGCC ATGTATCAGG ATAAAGCCGC GCACCACAGT
GATGCGCCTT AA
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| Protein sequence | MQLPTIPENE LQRLATLRAL NVLDTDAEER FDRITRLTRR IFSLPICVVT LVDAERQWFK
SRQGLEVTET PREISFCGHA INQDDIFIVN DALKDPRFSD NPLVTEQPHI RFYAGYPLTI
HRQYRVGTLC LIGTEPRDFT AEDIETLTDL GEMVEAELLS IAQNTLDPLT TISNRRGFEL
LAHQALASCR RTESEAALLF FDLDFFKEVN DNFGHLKGDQ VLYDFAHILM TAFRESDVIA
RLGGDEFVVL LSFVHRDTVD RVIERFKQLL EQYNQQHPKQ NSLATSIGIA HWTPDSDVSL
EDLLDSADKA MYQDKAAHHS DAP
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