Gene Shew185_0892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_0892 
Symbol 
ID5370654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1055062 
End bp1056036 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content50% 
IMG OID640829087 
Producthypothetical protein 
Protein accessionYP_001365109 
Protein GI152999428 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.94447e-05 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGGAA TGCTAACCCG TGTTCTCACA TCGATCCTCT TTTTAGCCGT TATGCTGTCG 
CTGACGGGTT GTGGCGATGA GAGACCGGAT AAAATCGCGA AGTATCAACA ACTCACGCAG
CAACGCCTCG CAACGCTCAC GACGATGATC GATGACGGGC AGTTGCGTAA CGCTAACCTC
TTAAAACAAT ACACCACACT GTTAAAGCAG CAGAAACCTG ATTTAGCCCC ATTACTTGAT
GAATTAGCAA AGGATTCTGG CACCCAAGGT CCCATGTATA CCTCGCTGAA ACGTCGATTA
GATGAATCGA AAGTGGCGAG TAACTTTGCC GATCTCGATC AACAACTGGC CGAAGCGGAA
AATCTTTATC AAGCCGCTGA TCCCAGTCTG TTTAACGATA TGTTGTCAGA CCCTGTCAAC
GTGGTTGCCG ATATGTCTGA CGGCAAGCTG GCCCGCGTGA ATGCGATTAG CCGTGAGGCC
GCAACATTAG CCAATGGCGG CGAAGATTTT GGTCCAGGCA GTCAGCTAGT TGGTAATCCG
TCTTACGGTA ACTGGCAAAC CGACTCGAGC GGCACGTCGT TTTGGGCTTG GTATGGCATG
TATTCGATGT TTTCGAATGT CTTCAATCGC CCTGTTTCCT ACGATCGTTG GTCGGGTAAC
CGAGGTTATA GCTATTACAA TGACGTAGGT CGTTATCGCT ATACCTCACC CAAACAAGCG
GATGCGCAAA ATAAGACCTT CGAACAAACG AAAAAACGTT TCGATTCCCA AGGTAAGCGC
TTCGACAGCC CTTATGCCAA ACCGCGTACC GGTGGCACGG CGTTATCCCG TGAAAGTACC
AGCACGCCAA AGGCCAGCAA CACCACGAGC GCAAGCAAGA GTTCGAGTAG TAAGTTCCGC
TCTAACTATG CTAAAGACAG CAGTTTCCGT AATTCCAGTA ATCGCACGAC CCGCAGTGTG
CGCCGGGGCA AGTAA
 
Protein sequence
MAGMLTRVLT SILFLAVMLS LTGCGDERPD KIAKYQQLTQ QRLATLTTMI DDGQLRNANL 
LKQYTTLLKQ QKPDLAPLLD ELAKDSGTQG PMYTSLKRRL DESKVASNFA DLDQQLAEAE
NLYQAADPSL FNDMLSDPVN VVADMSDGKL ARVNAISREA ATLANGGEDF GPGSQLVGNP
SYGNWQTDSS GTSFWAWYGM YSMFSNVFNR PVSYDRWSGN RGYSYYNDVG RYRYTSPKQA
DAQNKTFEQT KKRFDSQGKR FDSPYAKPRT GGTALSREST STPKASNTTS ASKSSSSKFR
SNYAKDSSFR NSSNRTTRSV RRGK