| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0870 |
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| Symbol | |
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| ID | 5371531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 1028982 |
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| End bp | 1030559 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640829065 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001365087 |
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| Protein GI | 152999406 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCAAA GCGTTGCCAC AAGAGACCAA TCTATGAGTT TTACCTCCCT GGGCTTATCG
GCCCCGATAC TTAAAGCCGT TGCCGAACAA GGCTACGACA CACCTTCGCC AATCCAAGCT
CAAGCAATTC CAGCTGTGCT TCAAGGCAAA GATGTGATGG CGGCCGCCCA AACAGGAACA
GGTAAAACAG CAGGTTTCAC CTTACCTATG CTCGAACTCC TGAGTAAAGG TAACCGTGCC
CAAGCAGGCC AAGTGCGCGC ATTAGTGTTA ACTCCGACAC GCGAATTGGC GGCTCAGGTT
GCAGAAAGTG TTGAAACCTA CGGTAAGAAT TTACCACTGC GCTCAGCGGT GATATTTGGT
GGCGTGCCTA TCAATCCACA AATCGCGAAA TTGCGCCACG GTGTCGACGT ATTAGTCGCC
ACACCAGGTC GATTGATGGA TCTGTACAAT CAAAAAGCGG TGAAATTCAG CCAGCTTGAA
ATCTTAGTAT TAGATGAAGC CGATCGCATG CTCGACATGG GCTTTATCCG CGACATCCGT
AAGATCCTGG CCATTTTACC TAAGCAACGC CAAAACCTGA TGTTCTCAGC CACCTTCTCC
GATGAAATTC GTGAGCTGGC AAAAGGCTTA GTGAACAATC CGGTCGAAAT TTCGGTCACG
CCACGTAACG CGGCGGCGAC CACAGTAAAA CAATGGGTTT GCCCAGTCGA TAAGAGCCAA
AAATCGGCAC TGTTGATCCA ACTCATCAAG CAAAACGATT GGCAACAAGT GCTGGTATTC
TCGCGCACTA AACATGGCGC TAACCGTCTG GCGAAAAGCC TTGAAGATGC AGGCATTAAA
GCCGCCGCTA TCCACGGTAA CAAGAGCCAA ACCGCCCGTA CTAAAGCTTT GGCCGACTTT
AAAAATGGTC AAGCTCGCGT ACTGGTTGCG ACCGATATCG CCGCCCGTGG TTTGGACATT
GACCAATTGC CACAAGTGGT TAACTTCGAC TTACCAAACG TGCCTGAAGA TTATGTGCAT
CGTATCGGCC GTACTGGCCG CGCTGGCGCA TCGGGTCAAG CCGTGTCACT GGTGAGCAAC
GAAGAAATCA AACTGCTGAA CGATATCGAG CGTTTGATCA ATCGCGTATT AGACCGAGAA
ATGGTTGAAG GCTTTAACCA TGTATTGCCT GAGTCACGTT TAGGTGGCGG CGGAAGAAGC
AGCGGTAAAC CAGTACCCAG CCGTAGAAAT ACCCGCAGCT CAAACCAACC TAGCTCACGC
GATGGTGCCC CAAGAAGCGC CGAGCATAAA GACGGTCAAC GCAGCGGTGA CGTCGCGCGC
GGTCACAAGC CAAACGACAA GAACCCAAGA CACAGTGGTG AAGCCAGTAG CGCACCCCGC
AGTGATGCCA AACCTCGTCC GCCACGTTCA AACGATGGCC GTGCCAATAG CGCAGGCGCT
AGTCGTCCAA GTGAAAGCCG TTCAGGTTCT GGCGAAAATC GTGGCCAAGC GGGTGAGAAC
CCTTACGCCA ATGGCCCAAA GAAAAACACC CGTCGCCCAA ATAACGGCGC GAGTCGTCCA
AGAAATTCAC AGGATTAA
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| Protein sequence | MQQSVATRDQ SMSFTSLGLS APILKAVAEQ GYDTPSPIQA QAIPAVLQGK DVMAAAQTGT
GKTAGFTLPM LELLSKGNRA QAGQVRALVL TPTRELAAQV AESVETYGKN LPLRSAVIFG
GVPINPQIAK LRHGVDVLVA TPGRLMDLYN QKAVKFSQLE ILVLDEADRM LDMGFIRDIR
KILAILPKQR QNLMFSATFS DEIRELAKGL VNNPVEISVT PRNAAATTVK QWVCPVDKSQ
KSALLIQLIK QNDWQQVLVF SRTKHGANRL AKSLEDAGIK AAAIHGNKSQ TARTKALADF
KNGQARVLVA TDIAARGLDI DQLPQVVNFD LPNVPEDYVH RIGRTGRAGA SGQAVSLVSN
EEIKLLNDIE RLINRVLDRE MVEGFNHVLP ESRLGGGGRS SGKPVPSRRN TRSSNQPSSR
DGAPRSAEHK DGQRSGDVAR GHKPNDKNPR HSGEASSAPR SDAKPRPPRS NDGRANSAGA
SRPSESRSGS GENRGQAGEN PYANGPKKNT RRPNNGASRP RNSQD
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