| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0868 |
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| Symbol | |
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| ID | 5369569 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 1025997 |
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| End bp | 1027373 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640829063 |
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| Product | ATP-dependent RNA helicase DbpA |
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| Protein accession | YP_001365085 |
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| Protein GI | 152999404 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTTTTT CGACTCTTAA GCTAAAACCC GAACTGCTTG AGAACCTTTC TTCTATGGGC
TACAACGAGA TGACGCCAAT TCAGGCGCAA AGTTTGCCAC CCATTTTAGC GGGGCAGGAT
GTGATAGGTC AGGGTAAAAC TGGCTCGGGT AAAACGGCCG CCTTCGGCTT AGGATTACTG
AACAAGTTAG ATGTTAAACG CTTTCGCATT CAAACCTTAG TGTTATGCCC AACCCGCGAG
TTGGCCGACC AAGTGGCGCA GGAAATCCGT ACCCTTGCCC GTGGTATTCA TAACGTTAAA
GTACTGACAC TTTGCGGCGG CGTGCCTATG GGGCCACAGG TTGGCTCGCT GGAACACGGT
GCGCACATTA TTGTGGGTAC GCCGGGTCGT ATCGTCGATC ACTTAGATCG CAATCGCCTA
GATTTAAGTA ATCTCAACAT GTTAGTGCTC GATGAAGCCG ATCGCATGTT AGAAATGGGC
TTCCAACCCG CCCTCGATGC GATTATCGAA CAAGCCCCAC GTGAGCGTCA GACGCTGCTA
TTCAGTGCGA CGTTCCCTGA GCAAATTCAA TCGATTGCTA AGCAAATCAT GTATGACCCA
AGCATGGTTA AAGTTGAAGG TAATCACGAC AGCTTGAGCA TCGCCCAACA TTTTTATCAT
TTAGACGATG ACAAGGCGCG CATGCAAGCG CTGCAATTAT TGTTGTTAGA ACATAAGCCT
GAAAGCGCTG TGGTGTTTTG TAACACGAAA CGCGAAACTC AAAAAGTGGC CGATGAGCTC
GAAGGTTTAG GCTTTAGCGT ATTGGCTTTG CACGGTGATT TAGAGCAAAG AGACAGGGAC
GAAACCTTGC TGCAATTTGC TAATAAGAGT GCCTGTGTAT TAGTGGCGAC CGACGTTGCC
GCCCGTGGTT TAGATATCGA TGCGCTGGAT GCCGTGTTTA ACTATCACGT TGCCTACGAC
ACCGAAGTCC ACATTCACCG TATCGGTCGT ACTGGCCGTG CGGGCAGTAA AGGCGCCGCT
TATACCTTCT ATAACGATCA AGACGGTTAC AAAATTGCCT TGTTAGAAGA GTATTTAGAG
CGCGAAATTA CCAGCGAATC ACTGCCATCT GAAAGCCTGC TCGGCAACAC GCCTGCAGCG
CCAACCATGA TCACTTTGCA GATCGATGGC GGTAAGAAAG AAAAACTGCG TCCAGGGGAT
ATCTTAGGCG CGCTGACGGG CGAAAACGGT ATCGAAGGCT CACAGGTGGG TAAAATCCAA
GTGACCGATT ACCGCGCCTA TGTGGCCGTT AATCGTAAGG TTGCCAAGAA AGCGCTGAAC
AAAATTACTG GCGGCCGCAT TAAAGGTAAA TCTTACCGCG CTTGGCCAAT GAAGTAA
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| Protein sequence | MAFSTLKLKP ELLENLSSMG YNEMTPIQAQ SLPPILAGQD VIGQGKTGSG KTAAFGLGLL
NKLDVKRFRI QTLVLCPTRE LADQVAQEIR TLARGIHNVK VLTLCGGVPM GPQVGSLEHG
AHIIVGTPGR IVDHLDRNRL DLSNLNMLVL DEADRMLEMG FQPALDAIIE QAPRERQTLL
FSATFPEQIQ SIAKQIMYDP SMVKVEGNHD SLSIAQHFYH LDDDKARMQA LQLLLLEHKP
ESAVVFCNTK RETQKVADEL EGLGFSVLAL HGDLEQRDRD ETLLQFANKS ACVLVATDVA
ARGLDIDALD AVFNYHVAYD TEVHIHRIGR TGRAGSKGAA YTFYNDQDGY KIALLEEYLE
REITSESLPS ESLLGNTPAA PTMITLQIDG GKKEKLRPGD ILGALTGENG IEGSQVGKIQ
VTDYRAYVAV NRKVAKKALN KITGGRIKGK SYRAWPMK
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