Gene Shew185_0863 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_0863 
Symbol 
ID5370272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1019256 
End bp1021169 
Gene Length1914 bp 
Protein Length637 aa 
Translation table11 
GC content49% 
IMG OID640829058 
ProductABC transporter related 
Protein accessionYP_001365080 
Protein GI152999399 
COG category[R] General function prediction only 
COG ID[COG0488] ATPase components of ABC transporters with duplicated ATPase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCAGCA TCAACCAAGC GCAATTAATC CGTGGCAGCA AAACCCTGCT AGATGAGACC 
TCTCTCACGA TTTATCCCGG CCATAAGGTC GGTTTAGTCG GTGCTAACGG CACAGGCAAA
TCTTCACTGC TCGCATTAAT TTTAGGTCAC TTAAGCCTAG ATAAAGGTGA ATTTAGTCTG
CCTTCTGGCT GGCAAATTGC CACTGTGGCC CAAGAAACCC CTGCGCTCGA CGTCTCGGCA
CTGGAATATG TGATCGATGG CGATAGCGAA TATCGTCAAT TAGAAGCCTT ATTACACAAG
GCCCAAGAAG ATAACGACGG CAATGCCATC GCACTCTTAC ACGGCAAAAT CGACGCTATC
GGTGGTTATG CGATTCATTC GCGCGCGGGT TCATTGTTAG CGGGTCTGGG CTTTAGTGAA
GCCGATCAAA GCAATCCAGT GAAAAGCTTT TCGGGCGGCT GGCGTATGCG CCTCAACTTA
GCCCAAGCGT TACTGTGCCG CTCTGACTTA TTGCTCCTCG ACGAACCCAC CAACCACTTA
GACTTAGATA CCATGTACTG GCTCGAAGGT TGGATTAAGT CCTATCAAGG CACGCTGATT
TTAATCAGCC ATGATAGGGA CTTTATCGAT GAAATCGTTG ATGAAATCGT CCACGTTGAA
AATCAAAAAC TCAATTTCTA CAAAGGCAAT TACAGTGCCT TTGAGCGCAT TCGTGCTGAA
CGTATGTCGC AGCAACAGGT TGCCTTCGAA CGCCAACAAA AAGAACGTGC GCACATGCAG
TCTTTCGTTG ACCGTTTCCG TTATAAGGCG AGTAAAGCCA AACAAGCGCA GAGCCGCTTA
AAAGCGCTAG AACGCATGAC TGAGTTGTTG CCGTCTCAAG CCGATAGCCC CTTTTATATG
GAGTTTCGCG CTCCAGAAGC CCTACCCAAT CCACTGATTA AGATGGAGCA AGTCGCGATC
GGCTATAGCG ATAAGCCAAT CCTGAGCAAG GTGCATTTAA ACTTAGTGCC GGGCGCGCGC
ATTGGTTTAC TCGGCCGTAA CGGCGCAGGT AAATCGACAT TAATCAAGCT GTTATCGGGC
CAATTGTCGC CAATGACTGG TTTGTATGAG CCTAACCCTG GCGTCAATAT CGGTTACTTT
GCCCAGCATC AAATCGAATT TTTACGTCTC GACGATACGC CGATGCAGCA TTTAGTGCGT
CTAGCGCCCA ATGCCAGAGA GCAAGAACTA CGCAACTTCT TAGGCGGTTT TGGTTTTAAC
GGCGATATGG CGCTCTCACC TGTACGCCCC TTTTCTGGCG GCGAGAAAGC CCGTTTAGTG
TTGGCGCTAT TAGTTTGGCA ACGCCCTAAC CTATTGCTGC TCGATGAACC GACCAACCAT
TTAGACTTAG AGATGCGCCA CGCCCTAACG ATGGCATTGC AAACCTTTGA AGGTGCTATG
GTTGTCGTCT CGCATGATAG GCATTTACTG CGATTAACCT GTAGTGATTA CTATCTGGTC
GATCAAGGTG AAGTGCGCGC CTTCGACGGT GACTTAGACG ATTATCACCA ATGGTTGCTC
GATGCGGCGA AAGCCAACTC GAATCAAAAC AGCACCAGTG ACGAGATCAA ACCTGCCGCC
GATAAAAAGC AGCAAAAACG CCTCGAGGCC GAAATCCGCC AAAAGGTATC GCCGCTCAAG
CGCAAACAAA CTAAGTTAGA AACCGAACAG CAAAAGCTGA GCGAACGCCT CGCCGAGCTA
GAACACTTGC TGGCCGATAG CGAATTGTAT GATCAAGATA ACAAAGCCAA GCTAACCTCG
GTATTAACTG AGCGAACGAG CTTGACGCAA ACCTTAGAAG ACAGTGAAAT GCAATGGCTC
GAGTTGCAAG AAGAGATAGA TGCAATGGAA CTTGAGGTCA TGGAGCAACA ATAA
 
Protein sequence
MISINQAQLI RGSKTLLDET SLTIYPGHKV GLVGANGTGK SSLLALILGH LSLDKGEFSL 
PSGWQIATVA QETPALDVSA LEYVIDGDSE YRQLEALLHK AQEDNDGNAI ALLHGKIDAI
GGYAIHSRAG SLLAGLGFSE ADQSNPVKSF SGGWRMRLNL AQALLCRSDL LLLDEPTNHL
DLDTMYWLEG WIKSYQGTLI LISHDRDFID EIVDEIVHVE NQKLNFYKGN YSAFERIRAE
RMSQQQVAFE RQQKERAHMQ SFVDRFRYKA SKAKQAQSRL KALERMTELL PSQADSPFYM
EFRAPEALPN PLIKMEQVAI GYSDKPILSK VHLNLVPGAR IGLLGRNGAG KSTLIKLLSG
QLSPMTGLYE PNPGVNIGYF AQHQIEFLRL DDTPMQHLVR LAPNAREQEL RNFLGGFGFN
GDMALSPVRP FSGGEKARLV LALLVWQRPN LLLLDEPTNH LDLEMRHALT MALQTFEGAM
VVVSHDRHLL RLTCSDYYLV DQGEVRAFDG DLDDYHQWLL DAAKANSNQN STSDEIKPAA
DKKQQKRLEA EIRQKVSPLK RKQTKLETEQ QKLSERLAEL EHLLADSELY DQDNKAKLTS
VLTERTSLTQ TLEDSEMQWL ELQEEIDAME LEVMEQQ