Gene Shew185_0848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_0848 
Symbol 
ID5372278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1006250 
End bp1007164 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content51% 
IMG OID640829043 
Productglutamate--tRNA ligase 
Protein accessionYP_001365065 
Protein GI152999384 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0008] Glutamyl- and glutaminyl-tRNA synthetases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.66391e-09 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGACTT TATCTTCTCC AACTTCAACT CATCGCCCCT ATGTCGGCCG TTTTGCGCCT 
TCGCCTTCGG GTGCCTTGCA CTTTGGCTCG CTTATCGCCG CCCTTGGCAG TTATCTGCGT
GCGCGCTCGC AACAGGGTAA ATGGTTAATT CGTATTGAAG ACATCGATCC TCCGCGGGAA
GTCAAAGGCG CGGCCGATGA TATCTTGCGC ACCTTAGAAG CCTATGGATT TGAGTGGGAT
GATGTGCCTC TGTATCAGAG CCAGCGCACT GCTGCCTATC AAGCACAAAT TGATTCGCTG
CTCGCCCAAG ATAAAGCTTA TTTCTGCCAA TGTAGTCGCA AGCAAATTCA AGCCATGGGC
GGCGTCTACG ATGGCCGCTG TCACCGCTTG CCACAAACCC AAGCTGCAAA TGTGGTTAAG
TCTGGGGCGG TGCGGATAGT TAATACCGCG CAAGTGCAGC AATTTGACGA TAACCTCATG
GGCCATATCA GCGTCGATAG CCATTTTGCT GCGGAGGATT TCATAATCAA ACGCAGCGAT
GGCCTGTACG CCTATCAACT GGCCGTGGTG CTCGACGATG CCTATCAAGG CATCACTGAA
GTGGTTCGAG GTTGTGACTT AATCGAAGCC AGTTGTCGCC AACTGAGTTT GTATCAAAAC
TTTGGCTTAG CCACACCGCA ATGGTTGCAC TTGCCGCTTG CCTGTTTGAG CAAGGGATTT
AAACTCTCTA AACAGAATCA TGCGCAAGCG ATTGATACGC TTAATCCACA GTCGAGCCTC
AATGCGGCGC TGACATTTTT AGGCCAACAA CCTGTTGAGA CCCAAGGTTC TGTGGCAGAA
ATGCTCGCTC AAGCCGTAGA TCAGTTTCAA TTATCCACTA TACCGCAACA ATCTGAGATA
CTGATCGAGC CCTGA
 
Protein sequence
MATLSSPTST HRPYVGRFAP SPSGALHFGS LIAALGSYLR ARSQQGKWLI RIEDIDPPRE 
VKGAADDILR TLEAYGFEWD DVPLYQSQRT AAYQAQIDSL LAQDKAYFCQ CSRKQIQAMG
GVYDGRCHRL PQTQAANVVK SGAVRIVNTA QVQQFDDNLM GHISVDSHFA AEDFIIKRSD
GLYAYQLAVV LDDAYQGITE VVRGCDLIEA SCRQLSLYQN FGLATPQWLH LPLACLSKGF
KLSKQNHAQA IDTLNPQSSL NAALTFLGQQ PVETQGSVAE MLAQAVDQFQ LSTIPQQSEI
LIEP