| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0815 |
|---|
| Symbol | |
|---|
| ID | 5370585 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 954693 |
|---|
| End bp | 959246 |
|---|
| Gene Length | 4554 bp |
|---|
| Protein Length | 1517 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640829010 |
|---|
| Product | carbamoyl-phosphate synthase L chain ATP-binding |
|---|
| Protein accession | YP_001365035 |
|---|
| Protein GI | 152999354 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000195166 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCAGCA ATAATCAGCC CACACACATG ACTCAAGCCC AAACGCCCGA TCCGCTTTTT
TTACAAGCCG AGCATTTGGC AAAGGATTTT TCTCTGTTTC CTAAGCACAG CAAACAGAGT
TTATCGGAAG AAATTAAAGG TCTTTTAAAT GAGGATGCCA TCCAGGCAAA CTTGAAAGAC
TTGGCATCGT TAGATGTCGA CGGTTACGTT ACTAAAGTGA TCCAGCCGAC CCAAGATAAA
GGTCGTCCTG GTGCAAAACG TATCATTGCC GATCTTAAAG GTCGCTTGAT TACCGAAACT
CACTTGGGCT CTTTTTACAG TGCTGAGGTC GAGCTGAACT TTGGTTCACG CACTCGTCGT
ATTGGCTTTA TCGCCCAAGA ACGCACTACC GCAAACGGTG CTTGGATGCC TGAGCATCAT
TACGCCGCCT GTAAAGCAAT TCGTCATTTT GCCGAATTGT CTATGCCTAT TATCTATTTA
ATTGATACTC CTGGAGCTGA TGCTGGCGAA ATCGCTAACA GCCAAAACCA AGCGCATTCA
ATTTCTAAAG CTATCGCAGA AAGCGCTAAC GTTGACGTAC CGACAGTCGG TATTGTGATC
GGTGCCGGTT ATTCTGGTGG TGCGATTCCA TTAGCGGCGG CGAACATTCT GTTGTCGTTG
CGTGACGGTA TTTTCAACAC GATCCAGCCA CAAGGTCTGC AAAGTATTGC CCGTAAGTAC
AACTTATCTT GGCAAGAATG TGCGAAATCT GTGGGTGTAT CACCAGAAGA GCTTTATACC
TCAGGCTGTA TCGACGGTAT CATCGACTTT TCACCGGGTG ACCGTGATGA GCGTCAGCAC
AATTTGCGCC GCGCTATTAT TAGCAGCGTA GAAGCGGTTG AGCGTGCAGC GATGAATTTT
GTGCGTGAAT CTAAAGATTT ACGTGAGCAT TATGACCGCA GCTTAACTCG TTTCCTAAAT
CCATCTAAAA ACTTGATGGC TTTGGAACTG AACGCAGAAT TGGCTGTGGC AACGAGCCCG
ACCAGTCACC ACAACCTGTT CGGTAGCGCC TATCGTTACC TGCGTTATTT AACGCTGCGT
AGCCGTATCC ATTCGATTTC TCAAGAACAA TATGGTCGTC TGTCACGTGC TAGCGTGCCA
GAAGGTGATC TGTTGGCGCG TATTCAACAA GAACAAGACC GTGTGTTCCA AGCTTGGTTA
TCTAACCCAG ATAAACTGGT TTATGACGAA GAGCTGAACA AATTGTGGAC TACTTTTGTC
GCTAAGCGTG ATGAAGTGTC TACCGAGCGT AACATGTTGA CTCGTTTGAT TTTGGGTGAA
CCAAAAGAGA ACTATAAGAA AGCACGTAAG GCGCTGTTAT TTAACATCAG CTGGTCTTTA
TATCACCGCT GGAAGAGCAA TGCGGCTAAC AACTTCAAAG GGCTTATTCA GCACTTAGAA
AGTTTGCCAA AGTCTGTGAC TCAAGCTAAA TGGCCTGAGC TGAATCAGCT GACCGTACTC
GATGTGGTTG TGAATGAAGA ACTGCGTGAA GACTTTATTT GGCAATGCCA TAACATTCTG
ATCTTCAATG CCTTATACGA CAACGTTGTC GGTAGCTTAG CGTCAATCGC GAAAGAAGCC
ATGATGTCGA AGAGTTTGTC ACGTAATTCA GTGAACAACC TGCTGCACAA GTCAATTGAC
CATGCAATGT CGACACAAGA TACCTCGAAC GACAAAGCTA AGTTCTACAA GTGGCTTAAA
TACTTCATGG GTCAATCGAA CCGTGCAGAT TTATTAGTCC GCGTAGAACA GTGGAAGAGT
GTGGGTTTCC CGCAGCTTAA CGACAGTCTA TTCGTGGTAC TGACTTACTT CTTCGAACGT
TTACTGCCTG AGTATTTCGA TAGCGAAAGC GATACCAGTA AGTACACTGG CGCGATCAAC
CCTGTGCGTA TCGGTCGTCG TAAGGACTTC TGGAACCGCT TGACCATGGG TTATCAGGAT
CTATTGATCC AAAAAGTGCT GCGTGACGAA AAACGTAAAG GCAACATGAC TTGGGAAAAT
GTGGTTAAAC AGTTCTTTAC CCATTTCGAA GAGATCAATG GCGACAAGAT GTCGGCTAAC
TTGCTCAACT TCCCAGGCTT CCGTTTATCG ATTGAAGACG CGTTAGATAA AGGCATTCGC
CCATGTGGTT TGATCACAGG TATTGCTGAC TTTAAAGAAA AAGGTCAAAA AGTGCGTGTG
GGTGTGGCTG TGTCTAACAC TGCATTCCAA GCCGGTGCAT TCGATATGGC CAGTGCCGAG
AAATTCTCAG CGCTGTTGAT CGAGTGTGCT AAGCGTAAAT TACCCGTTGT GTGCTTTATC
AGTTCAGGCG GGATGCAGAC TAAAGAAGGT GCCGCGGCGC TATTCTCTAT GGCTGTGGTG
AACGACCGTA TCACGCGCTT TATTCGTGAT AACGAATTGC CTGTACTGAT GTTTGGTTTT
GGTGACTGTA CTGGTGGTGC GCAGGCGAGT TTTGTGACTC ACCCATTAGT GCAAACTTAC
TACCTGTCTG GCACTAACAT GCCATTCGCA GGCCAAATGG TAGTGCCAGC TTACTTGCCA
TCAACGGCAA CCTTGTCTAA CTACTTGTCA AAAGTACCTG GCGCAATGGC GGGCTTAGTC
CATAACCCTT TCAGCGACAA TTTAGACTCT CAGTTAGCGG GTATCGATCC TCTGATGCCA
ATGCCTTCGG CAAAAATTAA CGACGTGATC ATCAATGCAC TGTCGACCTT AGTGGTTGAA
GCAACTGTTG AAGAAGAAGT GATCGTGCAG AACGATCCAC GCCAGTTAAT GAAGCCAATT
AACAAAGTAT TGGTTCACGC CCGTGGTTGT ACTGCGGTGA AATTGATCCG TAAGGCGCAT
GACAATAATA TCAATGTGGT ATTAGTGGCG TCGGATCCTG ATATGACATC AGTGCCAGCG
GACATGCTCA AAGATTCCGA CAAGTTAGTT TGTCTCGGTG GTAACACCTC GGATGAAAGT
TACTTGAATG CATACTCAGT GCTGAAAGTG GCCGAGTATG AGCAAGTGGA TGCATTACAC
CCTGGTATCG GTTTCCTATC AGAAAGCCCG CAGTTTGCTG CATTGTGTGT GAATAACGGT
GTTAACTTCG TCGGTCCTAG TGTGCATTCA ATGACGACTA TGGGTAACAA GTCGAACGCG
ATTAAGACAT CGCAAGCGCA AAATGTACCT GTAGTGCCAG GTTCTCACGG TATTCTGACT
AATGCTGAGC AAGCCGTTAA CGTGGCGAGC GAAATTGGCT ATCCAGTACT GCTTAAAGCG
GTACAAGGTG GTGGCGGTAA AGGTATTCAG GTAGTGAAAC GCCCTGAAGA CATGATTGGT
CTATTCCAAA AAACTGCGAC TGAAGCGGCT GCAGCCTTTG GTAACGGTGA CTTGTACCTA
GAGAAATATG TGACATCGCT GCGTCACATC GAAGTGCAGT TACTGCGTGA CAAGTTCGGC
AACGCCAAAG TATTAGGTTT GCGTGACTGT TCGGTTCAAC GTAACAACCA AAAAGTAGTC
GAAGAATCTG GTTCAACTAT GTTGCCAGAT GAGCTGAAGA GACAAGTACT GGCTTATACC
CGTGCTTTAG GTGACGCGAC TGATTACATG GGCGCAGGTA CCGTTGAGTT CATCTATAAC
TTAGATGCAA ACGAAGTTTA CTTCATGGAA ATGAACACGC GTCTGCAGGT TGAGCATCCA
GTAACGGAAG CGACGTCAGG TATCGATATC GTTAGCGCGC AGTTTGATAT CGCCGCTGGC
CGTTCAATCG AAGCGTTGGA GCCGAAAGAA ATTGGTTATG CGATGGAAGT ACGTGTGACG
GCTGAGAAAG CGGCGCTCGA TAGCCATGGC ATACTGCAGC TGATCCCAAA TCCAGGCAAG
ATCACTGAAT GTGTGTTCCC AGAACATCCA GATGTGGAAA TCATTTCGAT TGCTGCGCCA
GGTAAAGAAG TATCGCCTTA CTACGACAGC TTGATTGCGC AAATCATCAT GCGCGGTGAA
AACCGTGAGG ATGTGATTGC CAAACTGTAC GAATACTTAG ACAGCGTAGT GCTGAAAGGC
ATCGCGACTA ACATTCCGTT ACTCAAGCTT ATTCTGAAAG ACGGTACCTT CAACGAAGGG
GTTTACGATA CTAACTATCT GCCACGTTTA ATGGCTGAGC TGGACATTCC TGCGTTGATC
GCTGAAATGG AAGCCGCTGC TGAAACTGTG GAAGTGGACA CTGAGTCACT GCGTGTTGGT
GAAAGTAACG AACTGAAAGT GTTAGCCCAA GGTGCAGGTA TCTTCTATAC CTCTTCTGCA
CCTGGTGAGG CGGATTTCGT GAAAGAAGGT GACATAGTCA CCGTCGATCA AACGCTAGCA
CTCACAGAAG CGATGAAGAT GTTCTCGCAA GTGACTTTAG CCGGCTTTAA CCGTCAGAGT
GCGATTCTGT ACCCTGAGGA TAAGAAGTAT CGCATCGAGC GCATCCTGAA CAGCAATGGT
CAGCAAGTGT CTCAAGGTGA CTTACTCTTC GTGGTCTCGC CAGTTGAAGA ATAA
|
|---|
| Protein sequence | MTSNNQPTHM TQAQTPDPLF LQAEHLAKDF SLFPKHSKQS LSEEIKGLLN EDAIQANLKD
LASLDVDGYV TKVIQPTQDK GRPGAKRIIA DLKGRLITET HLGSFYSAEV ELNFGSRTRR
IGFIAQERTT ANGAWMPEHH YAACKAIRHF AELSMPIIYL IDTPGADAGE IANSQNQAHS
ISKAIAESAN VDVPTVGIVI GAGYSGGAIP LAAANILLSL RDGIFNTIQP QGLQSIARKY
NLSWQECAKS VGVSPEELYT SGCIDGIIDF SPGDRDERQH NLRRAIISSV EAVERAAMNF
VRESKDLREH YDRSLTRFLN PSKNLMALEL NAELAVATSP TSHHNLFGSA YRYLRYLTLR
SRIHSISQEQ YGRLSRASVP EGDLLARIQQ EQDRVFQAWL SNPDKLVYDE ELNKLWTTFV
AKRDEVSTER NMLTRLILGE PKENYKKARK ALLFNISWSL YHRWKSNAAN NFKGLIQHLE
SLPKSVTQAK WPELNQLTVL DVVVNEELRE DFIWQCHNIL IFNALYDNVV GSLASIAKEA
MMSKSLSRNS VNNLLHKSID HAMSTQDTSN DKAKFYKWLK YFMGQSNRAD LLVRVEQWKS
VGFPQLNDSL FVVLTYFFER LLPEYFDSES DTSKYTGAIN PVRIGRRKDF WNRLTMGYQD
LLIQKVLRDE KRKGNMTWEN VVKQFFTHFE EINGDKMSAN LLNFPGFRLS IEDALDKGIR
PCGLITGIAD FKEKGQKVRV GVAVSNTAFQ AGAFDMASAE KFSALLIECA KRKLPVVCFI
SSGGMQTKEG AAALFSMAVV NDRITRFIRD NELPVLMFGF GDCTGGAQAS FVTHPLVQTY
YLSGTNMPFA GQMVVPAYLP STATLSNYLS KVPGAMAGLV HNPFSDNLDS QLAGIDPLMP
MPSAKINDVI INALSTLVVE ATVEEEVIVQ NDPRQLMKPI NKVLVHARGC TAVKLIRKAH
DNNINVVLVA SDPDMTSVPA DMLKDSDKLV CLGGNTSDES YLNAYSVLKV AEYEQVDALH
PGIGFLSESP QFAALCVNNG VNFVGPSVHS MTTMGNKSNA IKTSQAQNVP VVPGSHGILT
NAEQAVNVAS EIGYPVLLKA VQGGGGKGIQ VVKRPEDMIG LFQKTATEAA AAFGNGDLYL
EKYVTSLRHI EVQLLRDKFG NAKVLGLRDC SVQRNNQKVV EESGSTMLPD ELKRQVLAYT
RALGDATDYM GAGTVEFIYN LDANEVYFME MNTRLQVEHP VTEATSGIDI VSAQFDIAAG
RSIEALEPKE IGYAMEVRVT AEKAALDSHG ILQLIPNPGK ITECVFPEHP DVEIISIAAP
GKEVSPYYDS LIAQIIMRGE NREDVIAKLY EYLDSVVLKG IATNIPLLKL ILKDGTFNEG
VYDTNYLPRL MAELDIPALI AEMEAAAETV EVDTESLRVG ESNELKVLAQ GAGIFYTSSA
PGEADFVKEG DIVTVDQTLA LTEAMKMFSQ VTLAGFNRQS AILYPEDKKY RIERILNSNG
QQVSQGDLLF VVSPVEE
|
|---|
| |