| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0692 |
|---|
| Symbol | |
|---|
| ID | 5372270 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 835290 |
|---|
| End bp | 836123 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640828886 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001364912 |
|---|
| Protein GI | 152999231 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGAAT CAAGCATGAC TCAAGAACAA ACGCCGTTGG TTGAGATCCG TAATTTGGGG
TTTAGCCGCG GTCAGCGTGT GATATATGAA GATATTAGCC TGTCCATTCC AAGGGGCAAG
GTGACGGCGA TCATGGGGCC GAGCGGCATA GGCAAAACGA CCCTGTTGAA GTTGATCGGC
GGCCAATTAA CGCCTGACCA CGGACAAGTG TTATTTGATG GTCACGATAT CCATGGCGTG
AGTCGCAATG AATTATTTAG TCTGCGTAAG CGGATGAGCA TGCTGTTTCA AAGCGGTGCG
TTGTTTACCG ACATCAACGT GTTCGATAAC GTGGCCTTTG CGCTGCGCGA ACATTCAGGT
CTGCCAGAAG ACATTATTCG CACTATCGTG CTGATGAAGC TCGAAGCCGT AGGTTTACGT
GGTGCCGCCC AGATGATGCC AAGTGAATTA TCCGGTGGTA TGCAGCGCCG TGCGGCATTG
GCCAGAGCCA TCGCACTTGA GCCTGAAATG GTGATGTACG ATGAACCTTT TGCCGGCCAA
GATCCTATCT CTATGGGCGT GTTAGTGAAG CTGATCCGTG AGTTATCCGA TGCGCTGAAT
CTGACCTCCA TTGTGGTCTC CCACGATGTG GATGAAGTCC TCGGTATTGC CGATTATGTG
TATGTGGTGG CCGATAAAAA AGTCATCGCC CACGGCACGC CAGAAGAATT GAAGTACGCC
GACAATCCGC AACTTAAACA GTTTATTCAA GGCGCGCCGG ATGGCCCTGT ACCGTTCCAT
TATCCGGCGA ATGATTACCA ACAAGAATTA ATGACAAAAG GAGTTGGCAA GTGA
|
|---|
| Protein sequence | MSESSMTQEQ TPLVEIRNLG FSRGQRVIYE DISLSIPRGK VTAIMGPSGI GKTTLLKLIG
GQLTPDHGQV LFDGHDIHGV SRNELFSLRK RMSMLFQSGA LFTDINVFDN VAFALREHSG
LPEDIIRTIV LMKLEAVGLR GAAQMMPSEL SGGMQRRAAL ARAIALEPEM VMYDEPFAGQ
DPISMGVLVK LIRELSDALN LTSIVVSHDV DEVLGIADYV YVVADKKVIA HGTPEELKYA
DNPQLKQFIQ GAPDGPVPFH YPANDYQQEL MTKGVGK
|
|---|
| |