Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_0667 |
Symbol | |
ID | 5373771 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 810653 |
End bp | 811495 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640828862 |
Product | AraC family transcriptional regulator |
Protein accession | YP_001364888 |
Protein GI | 152999207 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTACAG CAAAACCCGT TGAAAACATT AACTATTGGC GTCATCCCAG CTTATCAGGC ATAGAACTGA GTCAGGCGGA ATTCACTCAT TTCAGCTTTG ATAAACATGT GCATCTGGAT TACCACTTAG GTGTGGTCAC CCAAGGTGCG CAGCAGTTTG TGAATAAGGG CAGCAGTTAT CAACTCGGTC AGCACAGTCT ATCGACCTTA AATCCAGACG AAACCCATGA TGGCCAGAGC CGCGATGCCG ACGGTTATCG GGTGAAAGTC ATGTCTATCC CCGTGGAATA TATGAATGAA GTCAGCCAAG AACTGGGGTT GAAGGAGCAC TTTTTCAGCG CGCCTATGGT GGATGACCCA ACGCTTTATC AATATTTTAT TCAGCTACAC GAACTATTAA TCCAAGGCCA ATGCAGTGCG CTCGCGGGCG AGTCCCATTT ACTGAACTTT ATTCATCTGC TGCTGGAGCG TTACCCAAGC GGCGTTTCAT CTTGTATATC TAAACCGAAT CAACCGCAGG GGTTATCTAA GTTGCAGGTG AGCTTAGTGA AGCAGCGAAT TCACGATGAA CCTTGGCATA ATACTCAGCT TGAAACCTTA GCCAATGAAG TGAGCTTAAG TAAGTTTCAG TTTTTACGGC AATTTAAACA GGCAACAGGG ATGACACCCC ATGCTTATCT CAAGCGGGTG CGTTTAGAGT TGGCGAAAAA ATCCTTAAGT CATGGCGCTC TAGTGGCGGA TGTGGCGCAG CAATTCGGAT TTTTTGACCA GAGCCATTTG AATAAAGCCT TTAAGCAGGC ATTCCTATTA TCGCCGGTGC AATTTCAGCG ACGTATGCTC TAG
|
Protein sequence | MSTAKPVENI NYWRHPSLSG IELSQAEFTH FSFDKHVHLD YHLGVVTQGA QQFVNKGSSY QLGQHSLSTL NPDETHDGQS RDADGYRVKV MSIPVEYMNE VSQELGLKEH FFSAPMVDDP TLYQYFIQLH ELLIQGQCSA LAGESHLLNF IHLLLERYPS GVSSCISKPN QPQGLSKLQV SLVKQRIHDE PWHNTQLETL ANEVSLSKFQ FLRQFKQATG MTPHAYLKRV RLELAKKSLS HGALVADVAQ QFGFFDQSHL NKAFKQAFLL SPVQFQRRML
|
| |