Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_0618 |
Symbol | aspA |
ID | 5369722 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 739676 |
End bp | 741115 |
Gene Length | 1440 bp |
Protein Length | 479 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640828816 |
Product | aspartate ammonia-lyase |
Protein accession | YP_001364842 |
Protein GI | 152999161 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1027] Aspartate ammonia-lyase |
TIGRFAM ID | [TIGR00839] aspartate ammonia-lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGATA CTAATAGCGT ACGGATCGAA GAAGATTTAT TGGGAACGAA AGAAGTGTCC AATGAATTTT ATTACGGCAT ACATACATTA CGTGCCATCG AAAACTTTAA GCTGAGTAAT CAAAAAATTT CCGATGTACC TGAATTAGTC CGTGGCATGA TGCTAACAAA GAAAGCTGCT GCCATGGCCA ATAGCGAATT AGGCGCTGTA AGTCCTGAAA TCGCTGACAA GATTATTGAA GCGTGCGATC TGATACTCAC AACGGGCCGA TTTGTGGATC AATTCCCAGT CGACGTGTAT CAAGGGGGCG CAGGCACTTC AGTCAACATG AATACCAATG AGGTATTAGC CAACGTTGCA CTGGAGATCA TGGGGCTTGA AAAAGGCCGT TACGATGTCA TCAATCCTAA TGATCATGTC AACAAGTGCC AATCGACCAA CGATGCCTAT CCAACAGGCT TCCGTATTGC GGTCATCAAC AGTACCGATA TTCTGCTAGA TGCATTAACT GACCTTATCA GTGCCTTCGA CACTAAAGCC GCAGAGTTTA AAACCGTCTT AAAAATGGGC CGCACTCAGT TGCAAGATGC CGTGCCTATG ACCTTAGGCC AAGAGTTTCA TGCCTTTGCT GTCACACTGC GAGAAGAAAT TAAGTCCATC AAGCGTTGCC AAGAATTGCT GTTAGAAGTG AACTTAGGCG CAACGGCCAT TGGTACCGGC CTTAACACGC CAGTGGGTTA TTCCTCACTC GCCATTAAAC ATCTGGCTGA AATCACTGGC CGCGCTTATG TGCCAGCGGA AGATTTAATC GAAGCGACCT CCGATTGTGG CGCCTACGTC ATGCTGCACA GTGCGATTAA GCGCATGGCG ATTAAAATGT CCAAGATTTG TAATGACCTA CGCTTACTGT CATCGGGTCC ACGTACAGGT CTTAAAGAGA TCAATCTGCC TGAATTACAA GCGGGTTCTT CTATCATGCC AGCTAAGGTT AACCCTGTGA TCCCTGAGGT CGTCAATCAG GTTGCCTTTA AGATTGTCGG CAACGATATC ACTATCACTA TGGCCGCCGA AGCGGGCCAG TTACAGCTTA ACGTCATGGA ACCTGTGATT GGTCAGGCGA TGTTTGAGTC ACTCAGTTTA ATGGGTAATG CCTGTATCTC CCTACGTGAG AAATGCGTTG AAGGTATCAC TGCAAACCCA GAGATCTGTA TGGCCCATGT GATGAACTCC ATTGGGATCG TGACCTACCT TAACCCCATC ATCGGCCACC ATGAGGGTGA CATCATCGGC AAGATTTGCG CCCAAACGGG TAAAAATGTC CGTGAAGTGG TACTCGAACG CGGTTTGTTA ACGGTTGAAG AACTCGATGA CATTCTCTCG GTTGAAAACC TGATGAATCC TAAGTACCAA GCTAAACGCA GCAGCAAAGC CAAAGTGTAA
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Protein sequence | MKDTNSVRIE EDLLGTKEVS NEFYYGIHTL RAIENFKLSN QKISDVPELV RGMMLTKKAA AMANSELGAV SPEIADKIIE ACDLILTTGR FVDQFPVDVY QGGAGTSVNM NTNEVLANVA LEIMGLEKGR YDVINPNDHV NKCQSTNDAY PTGFRIAVIN STDILLDALT DLISAFDTKA AEFKTVLKMG RTQLQDAVPM TLGQEFHAFA VTLREEIKSI KRCQELLLEV NLGATAIGTG LNTPVGYSSL AIKHLAEITG RAYVPAEDLI EATSDCGAYV MLHSAIKRMA IKMSKICNDL RLLSSGPRTG LKEINLPELQ AGSSIMPAKV NPVIPEVVNQ VAFKIVGNDI TITMAAEAGQ LQLNVMEPVI GQAMFESLSL MGNACISLRE KCVEGITANP EICMAHVMNS IGIVTYLNPI IGHHEGDIIG KICAQTGKNV REVVLERGLL TVEELDDILS VENLMNPKYQ AKRSSKAKV
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