Gene Shew185_0608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_0608 
Symbol 
ID5369863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp726613 
End bp728559 
Gene Length1947 bp 
Protein Length648 aa 
Translation table11 
GC content44% 
IMG OID640828806 
ProductABC transporter related 
Protein accessionYP_001364832 
Protein GI152999151 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAGAAG TTCTGTTAAA TATTGTGGAT GTCAGCCGCT CTTTTATTGC CGGAGAGCAG 
GAGTTGACGG TACTAAAAAA CATTAATCTG CAAATCTGTC GTGGTGAATT GATTGCCATT
ATTGGCGCTT CTGGTTCGGG TAAATCAACA TTAATGAACA TCCTTGGCTG TCTGGATAAA
CCCAGTGCAG GTAGTTATTT CATTAATGGT CAGGACACAT CCCGTATGGA TGACAATGAA
CTAGCCGCAC TGCGACGTGA ATACTTTGGG TTTATCTTTC AGCGCTATCA TCTTTTAGGT
GATTTAACTG CGCAGGGTAA TGTAGAAGTA CCGGCATTAT ATGCCAATGA GGGGGCGCAA
ACCCGACACG AAAAGGCAAA AAAACTACTG ACTCGTCTGG GATTAAGCGA TCGTTTAGAT
CATAAGCCAA GCCAGCTAAG TGGTGGCCAA CAACAGCGTG TCAGTGTCGC CAGAGCTTTA
ATCAATGGCG GTGATATTAT TCTGGCCGAT GAGCCAACCG GCGCGCTTGA TAGCAGTAGC
GGCGAAGAAA TGATGAAGCT CATTCAAGAA CTCAATCGCG ACGGTCACAC CATTATTTTG
GTGACACACG ATCCGCATAT TGCCGAATTT GCAGATCGCG TCATTGAGCT AAAAGATGGA
GAAATCATTG CCGATAAACA AAAGCGTATC CCCGTAAAAG CAAACCAGCT AAGCACAGAC
CAACAAGCTT CTAAAACGAG TAAGAAAATA AACTGGTCGC GTTATCTTGA AGCGTTAAAA
ATGGCATTAA TTGCAATGTC CAATCACCGT TTGCGTACGT TTCTGACGAT GCTCGGCATT
ATTATTGGCA TTGCTTCAGT GGTGTCTGTT GTCGCGCTAG GTGCAGGTTC GCAGCAATCG
ATTTTGGACA ATATTGCTTC AATGGGCACT AATACTATTG AAATAAAACC AGGCACAGGG
CGTGGCGATC GCCGGTCTGA ACGGGTTAGG TCGCTCACGG CAGACGATGC AAATGCGCTT
AAAATATTGC CCTATGTGGA CAGCGTAACC CCAACCGTTA GGACCAATGT TGCCATACGT
TATGCAAGTG AAACCGTCAC AGGCTCAATT CAAGGCGTGG GTACTGAGTA TTTTCGCGTT
CGTGGTTATG CGTTGGCCAA AGGACAATAT TTTGCCGATG ATAGTATTGA TACGTTAGAG
CAGGTTGCCG TCATTGACGC CAATACCGAT CAGACTCTTT TCCCTGACGG CAATGCGTTG
GGTAGCGTCA TTTTTCTCGG TCGTCTACCT GTTCGTATTA TTGGCGTAAC AAAGCCAATT
CAAAGTGTGT CCGACAATAG TGATGAACTG AATGTTTGGT TGCCGTACAC CACGGTGTCC
GGGCGTATTT TTAGGCAAAA TTATGTTAAC GATATTACCG TAAGGATAGA TGCGAATGTA
TCTAGCGATG CGGCAGAACA AGGCATTATC AGCTTATTGA CTATGCGCCA TGGTACGGTT
GATTTTTTCA CTATAAATAC AGATACGATA CGAAAAAGCA TCGAAAAAAC ATCTGAAACC
ATGACACTAC TGATATCAGC TATTGCGTTT ATCTCTTTGT TAGTTGGTGG GATTGGGGTA
ATGAATATCA TGCTGGTATC GGTAACAGAG CGAACGCGCG AAATAGGTAT TCGTATGGCT
GTTGGCGCTA GACAAACCGA TATTATGCGT CAGTTTTTGA TTGAAGCAGT ATTGGTGTGT
TTTTGTGGTG GTGCATTGGG GATCGGACTT GCTTATTTTA TCGGCATGAT ATTTACCTAC
ACAGGCAGCA GTTTTCAGAT GATCTATTCG AGTACGTCAA TTGTTGCAGC TTTTGCTTGT
TCGACGTTAA TCGGGATTGT GTTTGGTTAT CTGCCAGCTC GAAATGCGGC TAAATTGAAT
CCGGTAGATG CACTCTCAAG AGACTGA
 
Protein sequence
MGEVLLNIVD VSRSFIAGEQ ELTVLKNINL QICRGELIAI IGASGSGKST LMNILGCLDK 
PSAGSYFING QDTSRMDDNE LAALRREYFG FIFQRYHLLG DLTAQGNVEV PALYANEGAQ
TRHEKAKKLL TRLGLSDRLD HKPSQLSGGQ QQRVSVARAL INGGDIILAD EPTGALDSSS
GEEMMKLIQE LNRDGHTIIL VTHDPHIAEF ADRVIELKDG EIIADKQKRI PVKANQLSTD
QQASKTSKKI NWSRYLEALK MALIAMSNHR LRTFLTMLGI IIGIASVVSV VALGAGSQQS
ILDNIASMGT NTIEIKPGTG RGDRRSERVR SLTADDANAL KILPYVDSVT PTVRTNVAIR
YASETVTGSI QGVGTEYFRV RGYALAKGQY FADDSIDTLE QVAVIDANTD QTLFPDGNAL
GSVIFLGRLP VRIIGVTKPI QSVSDNSDEL NVWLPYTTVS GRIFRQNYVN DITVRIDANV
SSDAAEQGII SLLTMRHGTV DFFTINTDTI RKSIEKTSET MTLLISAIAF ISLLVGGIGV
MNIMLVSVTE RTREIGIRMA VGARQTDIMR QFLIEAVLVC FCGGALGIGL AYFIGMIFTY
TGSSFQMIYS STSIVAAFAC STLIGIVFGY LPARNAAKLN PVDALSRD