Gene Shew185_0604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_0604 
Symbol 
ID5370480 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp722296 
End bp722979 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content45% 
IMG OID640828802 
Producttwo component transcriptional regulator 
Protein accessionYP_001364828 
Protein GI152999147 
COG category[T] Signal transduction mechanisms
[K] Transcription 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00704602 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGTAT TGCTTGTCGA AGATGAACAA AAAATTGCAG ATTTTATCTG TGAAGGTTTG 
CGTGCCAAAC ATTTCAACGT CACTCATTGT GCCGATGGCA ATCAAGGTTA TCAGGCGGCA
AGTAATAATA CTCATGATGT GATTATTCTC GACATTATGC TACCGGGCAG AGATGGTTTG
GATATTCTTC GTTCGCTGCG TCAACAAGGT GTCGATACGC CCATTATTCT GCTTACGGCA
CGTAATGAAT TGGGTGATCG CGTTCAAGGG TTAGACATGG GCGCTGATGA TTACTTAGCA
AAACCGTTTT ATGTTGAAGA GTTGCATGCT CGGATTCAAG CCTTGCTTCG ACGGCATGGC
GGCACACAAC AGCATGTCGT TGAGGTAGGC GCGTTGCAAC TTGATTGTAT TAATCGAAGC
ATTAATTGTC AGGGTCAATC AGTCGAACTC ACTAGCCGAG AATTTAGCTT GCTTGAACAC
TTAATGCGTT CACCTAACCA AGTATTAACC CGGGGGCAGT TGTTGGAGCA TGTTTGGGGA
TACGACTTTG ATCCTTGTAC CAATGTTGTT GATGTGTGCA TTAAACGCAT CCGCAGTAAA
ATGGCTTCAT TAGAGAAGGC CGGAAAAATG GTCGGCGCCA TTGAGTCGAT CCGCGGCACA
GGTTATCGCC TGAGCATTCG ATAA
 
Protein sequence
MNVLLVEDEQ KIADFICEGL RAKHFNVTHC ADGNQGYQAA SNNTHDVIIL DIMLPGRDGL 
DILRSLRQQG VDTPIILLTA RNELGDRVQG LDMGADDYLA KPFYVEELHA RIQALLRRHG
GTQQHVVEVG ALQLDCINRS INCQGQSVEL TSREFSLLEH LMRSPNQVLT RGQLLEHVWG
YDFDPCTNVV DVCIKRIRSK MASLEKAGKM VGAIESIRGT GYRLSIR