| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0519 |
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| Symbol | |
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| ID | 5372680 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 596115 |
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| End bp | 596888 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640828724 |
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| Product | diguanylate phosphodiesterase |
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| Protein accession | YP_001364750 |
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| Protein GI | 152999069 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTTCC CCGCTCGAAT AAAGCAGCAA ACATGCATGG ATTGCTTAAG TGGTAAGTCA
TTAGGATTTG AAATTCGCAT GGCATTTCAA CCTATCATTC ATTGGCCCAG CCGTGAGATT
AGCGGTTATG AAGCCCTTGT TAGAGGTCCC GAAGGTGAAG GGGCCGCGTG GGTGTTTGCG
CGAATTAACG ATAGCAACAA GTACTATTTT GATCAGGCTT GCCGGGTTAA AGCGATAGAA
ACCGCTTCAA AGTTGGGACT CGATAAGATG CTCAGTATCA ACTTTCTACC CAATGCCGTG
TATAACCCTG AAACCTGTAT CCGCGCGACG ATTGAAGCCG CCGACATGTA TGGGTTTGAT
ATCCACAAAA TTATGTTTGA AGTGACAGAG GGTGAGCAAA TTGTCGATCG GGCGAAATTA
GTCCGCATCT TCGAGAGTTA TGCTAAGCGT GGTTTTATCA CCGCAATCGA TGATTTTGGC
AGTGGTTTTG CTGATTTAAG TTGGTTGGAT GCCCTGCGTC CCCAAGTGCT AAAACTCGAT
ATGACGTTGA TCCGTGATAT TGATGTCGAT AAAGAAAAAC AGCTGGCGGT GGATGAAATA
CTGCGTATTT GCCTAGAACT TAATACAAGA GTCTTGGCCG AAGGCCTTGA GAGCGAAGCC
GAACTGAATT ATCTCGCTGG AATCGGGATT GAGTATTTTC AGGGTTATTA CTTTGCTAAA
CCTAAGCTCG AACATTTAAC TACCTACGAA GAGCTGAACT TTCATGCACC ATAG
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| Protein sequence | MDFPARIKQQ TCMDCLSGKS LGFEIRMAFQ PIIHWPSREI SGYEALVRGP EGEGAAWVFA
RINDSNKYYF DQACRVKAIE TASKLGLDKM LSINFLPNAV YNPETCIRAT IEAADMYGFD
IHKIMFEVTE GEQIVDRAKL VRIFESYAKR GFITAIDDFG SGFADLSWLD ALRPQVLKLD
MTLIRDIDVD KEKQLAVDEI LRICLELNTR VLAEGLESEA ELNYLAGIGI EYFQGYYFAK
PKLEHLTTYE ELNFHAP
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