Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_0506 |
Symbol | |
ID | 5371526 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 577500 |
End bp | 578474 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640828711 |
Product | secretion protein HlyD family protein |
Protein accession | YP_001364737 |
Protein GI | 152999056 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCGCTA ACAGAATACT TGCCCTTGTG GCGTTGGTCG CATTAGGCCT TATCTTGGCC TATGGCCTCA AGCTGGCTTA CAGTCCGCAG CCGAGCCTGT TGCAGGGCCA GATTGAAGCC CGCGAATACA ATGTCTCCTC TAAGGTGCCA GGCCGTGTTG AGCAAGTGCT GGTGCGCCGT GGTGACAGTG TGGCCGAAGG TGATTTGCTG TTCGCCATCA ACAGCCCTGA GTTGGATGCT AAGTTGATGC AAGCCGAAGG TGGCCGCGAT GCCGCTAAAG CGATGCAGCT TGAAGCTAAC AACGGTGCCC GTAGCCAAGA AGTGATGGCG GCCAAAGAGC AATGGCTCAA GGCACAGGCA GCGGCAACGC TGGCTAAAAC CACTTATACC CGCGTCGAAA ATCTCTTCAA CGAAGGTGTG GCCGCGAGAC AAAAACGCGA TGAAGCCTTT ACCCAATGGC AAGCGGCGAA ATACACAGAG CAAGCGGCAT TAGCCATGTA TCAAATGGCG CAGGAAGGGG CGCGGGTTGA AACCAAAGCC GCTGCCGCCG GGAACGCCCG TATGGCCGAA GGTGCGGTAA AAGAAGTTAA CGCCATTATG CAAGATAGCC AAATGCGTGC GCCTAAGTCG GGTGAAATCA GCGACGTGCT ATTGCAGGCC GGTGAATTAG CGCCGAGCGG TTTTCCGATT GTGAGCCTGA TTGACATGCA GGATTCATGG GCCGTGTTCC AAGTGCGCGA AGATCAACTT AAGCGCTTCA AGCAAGGCCA AAAAGTTCAG CTGAATATTC CAGCGCTCGG GCAAGATGTG GAATTTACTG TGTCCCATAT CAGCGTCATG GGCGATTTTG CTACTTGGCG CTCGACCGAA AGTGGCCACG ATTTTGATAT GCGCACCTTC GAGGTGGAAT TGCGTCCAAG CCAGCCGATT GCCGATCTGC GTGTCGGTAT GTCTGTGCTG CTGCGCAGTG AGTAA
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Protein sequence | MRANRILALV ALVALGLILA YGLKLAYSPQ PSLLQGQIEA REYNVSSKVP GRVEQVLVRR GDSVAEGDLL FAINSPELDA KLMQAEGGRD AAKAMQLEAN NGARSQEVMA AKEQWLKAQA AATLAKTTYT RVENLFNEGV AARQKRDEAF TQWQAAKYTE QAALAMYQMA QEGARVETKA AAAGNARMAE GAVKEVNAIM QDSQMRAPKS GEISDVLLQA GELAPSGFPI VSLIDMQDSW AVFQVREDQL KRFKQGQKVQ LNIPALGQDV EFTVSHISVM GDFATWRSTE SGHDFDMRTF EVELRPSQPI ADLRVGMSVL LRSE
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