| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0503 |
|---|
| Symbol | |
|---|
| ID | 5373680 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 573425 |
|---|
| End bp | 574255 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640828708 |
|---|
| Product | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase |
|---|
| Protein accession | YP_001364734 |
|---|
| Protein GI | 152999053 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0388] Predicted amidohydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACATCA GCCTGTTGCA ATGTCAGAGC AGTCGCGACG TCAGCGCCAA TCTGCTGTTT
ATCGAATCGC AGCTTAACGA ACTCAAACGG GATGCCGATG CGCCCCATTT AGTCGTATTG
CCCGAATGCA GTTTACTGTT TGGTGGCCAC GAAAGTCAGC AACTCGCCTA TGCGGGTGAT
GCTCATCAGA GTCCGCTCAA ATCGGCGTTA AGTGCATTGG CCGCCAAATA TCAGGTATTT
ATGGTGGCAG GCACTATTCC GGCGCTGGCT GAGGATGGCC GCGTCTATAG CCGCAGTTAT
CTGTTTGATG ATAAAGGTGA TACTTTAGGG TATTACGATA AGCTGCATCT CTTTGATGTG
GATGTTGCCG ATGGTACAAA ACAATATCGT GAGAGCGAAA CCTTCTGCCC CGGTGATCAC
ATTAGCGTTA TCGATACACC TTTTGGCAAA ATTGGCTTAG CCATCTGTTA TGATTTACGC
TTTCCTGACT TATTTAGGGC GATGCGTCTT GCGGGTGCCG AGATCATTAC CTTGCCGTCG
GCCTTTACCA AAGTAACCGG TGAAGCCCAT TGGCAAGTCT TGTTACAGGC AAGAGCCATT
GAAACCCAAT GCGTTATTCT TGCCGCCGCT CAGTGGGGAC AGCATAACGA AGGCAGTCGT
GAAACTTGGG GGCAGAGCAT GATAGTCGGT CCTTGGGGCA ACATTTTGGC TGAACGTAAA
ACGGGTACGG GTTGGGTGCA GGCTGAGGTC GATTTAACCG AACTGCACAG TATTCGCCGT
AAAATGCCCG TGATGCAGCA TAATCGTTTC CTTGAGCCAA GCTTGAAATA A
|
|---|
| Protein sequence | MHISLLQCQS SRDVSANLLF IESQLNELKR DADAPHLVVL PECSLLFGGH ESQQLAYAGD
AHQSPLKSAL SALAAKYQVF MVAGTIPALA EDGRVYSRSY LFDDKGDTLG YYDKLHLFDV
DVADGTKQYR ESETFCPGDH ISVIDTPFGK IGLAICYDLR FPDLFRAMRL AGAEIITLPS
AFTKVTGEAH WQVLLQARAI ETQCVILAAA QWGQHNEGSR ETWGQSMIVG PWGNILAERK
TGTGWVQAEV DLTELHSIRR KMPVMQHNRF LEPSLK
|
|---|
| |