| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_0484 |
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| Symbol | |
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| ID | 5370706 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 547977 |
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| End bp | 549656 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640828689 |
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| Product | pilus (MSHA type) biogenesis protein MshL |
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| Protein accession | YP_001364715 |
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| Protein GI | 152999034 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | [TIGR02519] pilus (MSHA type) biogenesis protein MshL |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGCGA TTAAATACTT TACACCTCTG CTCTCACTTT GCCTTGTGGC GTGTCAGACC
ACAAACAGGC CACAGCCGGA GGCGAGTAAG GCGGAATTAG CGGCCTCAAT GGCGACGGCT
ACGGCATCAA CGACGCCACC GCCTGCGACT ATGCCGGATG CGGTTCAGCG AGAATTGAAT
TCGGGCGCTT TACTGTCAGG CTTAACCCCT GCGCTGGAAA CTGAGCGTCG TTTCGATGTA
TCTGCCCATG ATGTGGATGC CAAAGTATTT TTTCCAAGTT TAGTCCAAGG TACGCCGCTG
AGTGTTGCTG TGCATCCTGA TGTGCAAGGT ACGATTTCGT TATCCCTTAA AGGTGTAACC
TTAAGCGAAG CGATTCAAGT GGTTGAAGAT ATCTACGGTT ACGAAGTGAG CCGTGAAGGG
CGTATTCTAA GAGTGTTCCC CGCTGGAATG CGTACTGAGA CTTTCCCGCT GAATTATCTT
TATATGGAGC GCGACGGCTT ATCTGTGACC TCAGTGAGTT CTGGGCGGAT TTCCGATAGC
AATAATTCCA ATAGTAATTC GAACAATAAC AACTCAAATA ACAGTGGTTC GAGTAATAAT
AATTCCAACA GCAGTAACGG CAACAACTCC AGCAGCAATG GCAGCAGCGA TAGCAGTAAC
GGTACATTTA TCCGCTCGCG CACTAAGACT GATTTTTGGG GCGAGCTGAA AGAAACGCTG
ACGGCGATTA TTGGTGACAC AGGAAATGGG CGGCAAGTGG TGGTTACGCC GCAGGCGGGT
TTAGTGACCA TTCGTGCTTT CCCTAGTGAA TTACGCCAAG TTCGCACTTT CTTAAATTCT
GCCGAGAGTC ATCTGCAGCG CCAAGTAATC TTGGAGGCTA AGATCATCGA AGTCACATTA
TCTGATGGCT ATCAGCAAGG TATCCAATGG GAGAATGTGC TGGGTCATGT CGGCAATACG
AATGTGAATT TTGGGACTTC GAAAGGCCCT GGGTTAAGCG ATAAAATCAC CTCGGCGATT
GGTGGCGTGA CCTCGCTGAG TATTAAAGGC TCCGACTTTA CGACCATGAT CAATCTGTTA
GATACCCAAG GCGATGTGGA TGTATTGTCT AGCCCAAGGG TAACAGCATC GAATAACCAA
AAAGCGGTGA TTAAAGTCGG TACCGATGAG TATTTTGTCA CTGACGTTTC ATCGACCACA
GTAGCGGGCG CAACGCCTGT GACCACTCCA CAAGTCGAGC TCACGCCGTT TTTCTCAGGC
ATTGCCTTAG ATGTCACGCC GCAAATTGAT AGTGACGGTA ATGTGTTATT GCACGTGCAT
CCATCCGTTA TCGATGTGAA AGAGCAGACT AAAGATATCA AAGTGAGTGA TGCTTCGTTG
GAGCTACCTT TAGCGCAGAG TGAAATTCGC GAGTCTGATA CCGTTATCCG CGCCGCTTCC
GGTGACGTAG TCATCATAGG TGGCTTGATG AAGAGCGAAA ATACCGAAGT CGTCTCGCAA
GTGCCTTTGT TGGGGGATAT TCCTTTCCTC GGGGAATTGT TTAAAAACCG CAGCAAGCAA
AAGAAGAAAA CTGAGCTGAT TATTCTGTTA AAACCTACGG TAGTTGGCGT CGATACCTGG
AAAACTGAGC TACAACGTTC TAAGACCTTA TTAGATCGTT GGTATCCGGA GACAAAGTAA
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| Protein sequence | MKAIKYFTPL LSLCLVACQT TNRPQPEASK AELAASMATA TASTTPPPAT MPDAVQRELN
SGALLSGLTP ALETERRFDV SAHDVDAKVF FPSLVQGTPL SVAVHPDVQG TISLSLKGVT
LSEAIQVVED IYGYEVSREG RILRVFPAGM RTETFPLNYL YMERDGLSVT SVSSGRISDS
NNSNSNSNNN NSNNSGSSNN NSNSSNGNNS SSNGSSDSSN GTFIRSRTKT DFWGELKETL
TAIIGDTGNG RQVVVTPQAG LVTIRAFPSE LRQVRTFLNS AESHLQRQVI LEAKIIEVTL
SDGYQQGIQW ENVLGHVGNT NVNFGTSKGP GLSDKITSAI GGVTSLSIKG SDFTTMINLL
DTQGDVDVLS SPRVTASNNQ KAVIKVGTDE YFVTDVSSTT VAGATPVTTP QVELTPFFSG
IALDVTPQID SDGNVLLHVH PSVIDVKEQT KDIKVSDASL ELPLAQSEIR ESDTVIRAAS
GDVVIIGGLM KSENTEVVSQ VPLLGDIPFL GELFKNRSKQ KKKTELIILL KPTVVGVDTW
KTELQRSKTL LDRWYPETK
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