Gene Shew185_0465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_0465 
Symbol 
ID5370875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp527951 
End bp529126 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content45% 
IMG OID640828670 
Productdiaminopimelate decarboxylase 
Protein accessionYP_001364696 
Protein GI152999015 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0019] Diaminopimelate decarboxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.04832e-10 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCAAT TTCAATCTAT TGATGTTGCT GACTATTATG ACATGGACAC ATTCAAGCGT 
ATTGAAGCGT TTGCCAAAGA CAAAGCAACC CCGTTCGTAG TGATTGATAC CAGTATCATA
GCGAAACAAT ACGATGACAT GGTTAATAGT TTTCCTTACG CCAACGTTTA TTATGCAGTT
AAGGCAAACC CCGCGGCCGA GATCTTATCT TTACTTAAAG ATAAAGGGTC AAACTTTGAT
ATTGCCTCGA TTTATGAGCT AGATATGGTC ATGAATGTCG GCGTGACAAC CGACCGAGTC
AGCTACGGCA ATACCATTAA AAAGCGTCAA GATGTACGTG CATTTTATGA GCGTGGTGTG
CGTATGTATG CATCCGACTC AGAAGCCGAT CTGCGAATGA TCGCCGAAGA AGCTCCGGGA
TCGCGTATTT ACGTGCGCAT TTTGACCGAA GGTACAGACA CGGCTGATTG GCCATTATCG
CGTAAATTCG GCTGCCAAAA CGAAATGGCC TATGAGCTAT TAGTATTGGC GCAGGAATTG
GGCTTAGAAC CTTTTGGTAT TTCGTTCCAC GTCGGTTCAC AGCAACGTGA TATCGGTGCT
TGGGATTCTG CCATAGGTAA AGTGAAAAGC ATTTTCGACC GTCTGCGTGA TGAGCACAAT
ATCACCCTGA AGATGATCAA TATGGGCGGC GGTTTCCCTG CTAACTATAT TGATAAAACC
AATCAATTGG GTGTGTATGC CGAGCAGATT ACTCACTTCC TGAAGGAAGA TTTCGGTGAC
GATTTACCGC AAATCATTCT GGAGCCAGGT CGTTCGTTGA TTTCTAACGC GGGGATTTTA
GTGTCTGAAG TGGTACTGAT CAGCAAAAAA TCCTACACAG CGTTAGAGCG TTGGGTGTTT
ACCGATGTGG GTAAATTCTC AGGCTTGATT GAAACGATGG ACGAGGCGAT TAAGTTCCCG
ATTTATACTG ATCGTCAAGG CGAGCTGGAT AAATGCGTGA TTGCCGGCCC AACCTGCGAC
AGTGCCGATA TCATGTATGA GCACTACAGC TATGGTTTAC CGAATGACTT AGCCATTGGT
GACCGCATGT ATTGGTTAAC CGCTGGCGCT TATACGACGA CGTATTCGGC AGTGTGCTTT
AACGGTTTCC CACCGCTGAA AGATTACTAT CTGTAA
 
Protein sequence
MSQFQSIDVA DYYDMDTFKR IEAFAKDKAT PFVVIDTSII AKQYDDMVNS FPYANVYYAV 
KANPAAEILS LLKDKGSNFD IASIYELDMV MNVGVTTDRV SYGNTIKKRQ DVRAFYERGV
RMYASDSEAD LRMIAEEAPG SRIYVRILTE GTDTADWPLS RKFGCQNEMA YELLVLAQEL
GLEPFGISFH VGSQQRDIGA WDSAIGKVKS IFDRLRDEHN ITLKMINMGG GFPANYIDKT
NQLGVYAEQI THFLKEDFGD DLPQIILEPG RSLISNAGIL VSEVVLISKK SYTALERWVF
TDVGKFSGLI ETMDEAIKFP IYTDRQGELD KCVIAGPTCD SADIMYEHYS YGLPNDLAIG
DRMYWLTAGA YTTTYSAVCF NGFPPLKDYY L